Gene Cthe_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0049 
Symbol 
ID4808814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp64209 
End bp64871 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content39% 
IMG OID640105458 
ProductXRE family transcriptional regulator 
Protein accessionYP_001036483 
Protein GI125972573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAT TAGGCGCGGA AATTGGAAGA CTGAGAAAAG AACTTGGAAT TACTCAAAAA 
CAGCTTGCCA AATTGGTGGG TGTGTCAGAA GGATTTATCA TTGATGTAGA GTCAGGCAGA 
AGGATACTCA ATGAAGACCT CATAAAGAAA TTTTCCAGAG TATTGCGGGG AGAAGTGGGA 
AAGTTGGAAT TATATGAACC TAACCAAGAC AAGCCGGAAC CGGACAGAAA TGTGGTGAAG 
GTTGTTGAAA AGCCTGTACA GGATATCTGG AATGATGCCC TTTCGGGAAT TCTTATGACT 
GTGCCTGTAT ACCGTTATAA AATGGACAAA GCTGTTGATG CAAAGCAGCT ACCTATAATA 
CAGAATAAAG TTGAAGGCTT TCCCAAGGAT AAAGTGTTCT ATCTGATTAT TGAAGATGAT 
GATATGTCCG GTTTTAGAAT ACTTAAGGAC GATCTTGCTT TGGTTTACAA AACCCATGAC 
ATTGATAAGG ATGGAATTTA TTTTGTTGAT TACAAAGGAA AGCGTACGGT AAGACAGATA 
AAAGACATCG GAAACGGCAA ATTGTTGCTT GTCAGCAACA GCGGAAGACT TATAACGGAT 
ACAATCTACA GAAAAGATTT AAACGTCCTG GGAAGATTGA TTCGAATCGA AATTATGCTG 
TAA
 
Protein sequence
MNRLGAEIGR LRKELGITQK QLAKLVGVSE GFIIDVESGR RILNEDLIKK FSRVLRGEVG 
KLELYEPNQD KPEPDRNVVK VVEKPVQDIW NDALSGILMT VPVYRYKMDK AVDAKQLPII 
QNKVEGFPKD KVFYLIIEDD DMSGFRILKD DLALVYKTHD IDKDGIYFVD YKGKRTVRQI 
KDIGNGKLLL VSNSGRLITD TIYRKDLNVL GRLIRIEIML