Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0045 |
Symbol | |
ID | 4808810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 58680 |
End bp | 59489 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640105454 |
Product | copper amine oxidase-like protein |
Protein accession | YP_001036479 |
Protein GI | 125972569 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TAGCTATTAC GATATTAACG GTATTTATGT TAACTGTTTT TTTGGCAAAT GTGGGTTATG CAATTGATAT ACCGCTTCGC GTAGTTGTAA ATGGGGAAGA GGTGAATTTC CCGGATGCAA AGCCGTTTAT TGATGCAAAC GGAAGAACAC AGACACCGGC AAGGTTTATT GGAGAAGCTC TGGGAGCGAC GGTAACCTGG GACGGAAATG CGAAGAAGGC TGTATTTAAG ATGAATGGAA CAACGTTGGA GTTGTTTATT GGGAAAAAGG AGTATCAGCT GAACAGGCAA AAGAAGCAGA TGGATACGGA AGCATTGTTG ATAGAGGGAA GGACGTTTGT ACCGGCTCGT TATGTGGCGG AAGCATTTGG CGCAACGGTT AGTTGGAGGG CTTCAATTAA GACGGTGTAT ATAGATATGA ATAAGACGGG TAAGGTGGAA AATGAAGGTG ATACCAGGGA AGTGGCCGGA TTTATAGTGC CGAAGGGGAT AGATTTAATG GTTGCAGGTG CAGATGAAGA TTCTGGTTAT GAAGCGGTTT TTACGATCTC CTTTTTAAGG AAGAATGTTG AAAAGCAGAA AGATGATATG GAGAAGATAT TATTACAAAA GTTTAGTGAA GATACGGTAA AAGAAATTAT GAGTGTTGTG AGATCAAAGG TAAATTATAC AGATGTTATT GAAGAGAGGT ATTTTTACGA CAAAAAAACT GACCAATATA TGTATATGCC TAAGTCATGG CCGACTAGAA CATCCACAAT TACTTTATTT ATATATAGGA AAGGAGATAA ACCTTTTTAG
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Protein sequence | MKKIAITILT VFMLTVFLAN VGYAIDIPLR VVVNGEEVNF PDAKPFIDAN GRTQTPARFI GEALGATVTW DGNAKKAVFK MNGTTLELFI GKKEYQLNRQ KKQMDTEALL IEGRTFVPAR YVAEAFGATV SWRASIKTVY IDMNKTGKVE NEGDTREVAG FIVPKGIDLM VAGADEDSGY EAVFTISFLR KNVEKQKDDM EKILLQKFSE DTVKEIMSVV RSKVNYTDVI EERYFYDKKT DQYMYMPKSW PTRTSTITLF IYRKGDKPF
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