Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0022 |
Symbol | |
ID | 4808787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 28483 |
End bp | 29649 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640105432 |
Product | 2-amino-3-ketobutyrate coenzyme A ligase |
Protein accession | YP_001036457 |
Protein GI | 125972547 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0282575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGATT TTCAAGGTGC TTTGAAAGAT ATAAAAAACA AGGGATTATA CAGGGAGTTT CGAAATGTTA ATGCTGCCCA GGGCCCGTAT ACCGTTATTG ACGGAAGAAA AATGCTTATG ATGTCATCAA ATAATTACCT GGGCTTGTGT GATGATATAA GGCTTAAAAG AGCTGCGATA GAATCTATTC GTAAATTTGG TGTGGGAGCC GGAGGCTCAA GGCTGACTTG CGGAAACTTT GAGCTTCACA GGGAGCTGGA GGAGAGGCTT GCAAAATTTA AGGATGTGGA AAGCTGTATT GTTTTTGGAA GCGGATATGC CGCAAATATA GGAGCAATAT CGGGAATTGC GGACAAAAAC TGGGTCATAT TCTGCGACCG TCTGAACCAT GCCAGCATTG TGGACGGCAT TCGCCTAAGC GGTGCAAAAC TTGTGGTGTA TAAACACTGC GACATGGAGG ACCTTGAAAG CAAGATTGTA CGCTATCATA CCGGCAAAAG CCTTATAGTA ACGGATGGCG TGTTCAGCAT GGACGGGGAT GTGGCACCGG TGGATAGGAT TGTGAAGTTG GCTAAAAAAT ACAATCTTAT GACAATGGTG GATGATGCCC ATGCCACAGG AATTTTGGGA GAAAAGGGAA GGGGGACGTC GGAGTACTTT GGCCTTAAAG ATGCTGTTGA TATAAGCATG GGTACTTTGA GCAAGGCTTT TGGTGTTGAA GGGGGATTTG TTGCAGGAAA GAGAAAGCTT GTTGATTTTT TACGGCACAA GGCCAAAAGC TTTATTTACT CTACTGCTCC GCCGCCTCAT AATATGGCTG CGGCGTTAGA AGCTTTGAAT ATCATAGAAA CGGAGCCGCA GGCAAGAAAG GAATTGGCTG AAAAATCCGT GTGGCTAAGA AACAGGCTTA TAGAAAAAGG TTTTAACGTG CCCAAAGGGG TGACGCCGAT AATACCGCTT ATGGTGGGAG ATGTAAATAC TGCAGTAGAG TTTAGTATGC TGCTTTATAA CGAAGGGATA TATATTCCTG CCATCAGGCC GCCAACAGTT CCTAAAGGAA CGAGCAGGCT TAGAATTTCC ATAATGGCTT CCCATTCCTA TGAAGACATG GAGTTTGCCC TTAAAAACCT TGTCCGGTTC GGAAGGAAGT TGGGGATAAT ACCATAA
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Protein sequence | MYDFQGALKD IKNKGLYREF RNVNAAQGPY TVIDGRKMLM MSSNNYLGLC DDIRLKRAAI ESIRKFGVGA GGSRLTCGNF ELHRELEERL AKFKDVESCI VFGSGYAANI GAISGIADKN WVIFCDRLNH ASIVDGIRLS GAKLVVYKHC DMEDLESKIV RYHTGKSLIV TDGVFSMDGD VAPVDRIVKL AKKYNLMTMV DDAHATGILG EKGRGTSEYF GLKDAVDISM GTLSKAFGVE GGFVAGKRKL VDFLRHKAKS FIYSTAPPPH NMAAALEALN IIETEPQARK ELAEKSVWLR NRLIEKGFNV PKGVTPIIPL MVGDVNTAVE FSMLLYNEGI YIPAIRPPTV PKGTSRLRIS IMASHSYEDM EFALKNLVRF GRKLGIIP
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