Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_3315 |
Symbol | trmE |
ID | 4028860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 3692371 |
End bp | 3693747 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637968530 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_575358 |
Protein GI | 92115430 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCA CGCCTCTTTA TCGACAAGAC ACCATCGCCG CGATCGCCAC GCCCCCGGGG CGCGGCGGCG TGGGCATCAT ACGCCTCTCG GGCCCGGCCA GCCGTGACCT CGCGGAACGC ATCCTCGGCC ACTGCCCGGC ACCACGCCAC GCCCACTACG GCCCCTTCTA CGATGCCGAC GCGCAGGTGC TCGACGAAGG CATCGCCCTG TTCTTTCCCG GCCCTCATTC CTTTACCGGT GAGGACGTGC TCGAGCTGCA GGGCCATGGC GGGCCGGTGA TCATGGACCT GCTGCTCGCG CGCTGCGTCG CCCTCGGCGC GCGCCTGGCA CGCCCCGGCG AATTCTCGGA ACGCGCCTTT CTCAACGACA AGCTCGATCT GGCCCAGGCC GAGGCGATCG CCGACTTGAT CGACGCCAGC TCCCGAGCTG CCGCCGAAAA TGCCCTGCGT TCGCTGCAGG GCGAGTTCTC GACGCGGGTC TCGGCACTCG TCGACAAGCT GATCGAGCTG CGGATGTTCG TCGAAGCCGC CATCGACTTT CCCGAGGAGG AGATCGACTT TCTCGCCGAT GGCAAGGTGG CCGCGATGCT TCAGGGTGCC CAGGAGACGC TTGGCGAGGT GCGCGCCGCC GCCGGCCAGG GGGCATTGAT GCGCGAGGGC ATGAACGTGG TCATCGCCGG GCGTCCGAAT GCCGGCAAGT CGAGCCTGCT CAACGCCTTG ACCGAGCGCG ACAGCGCCAT CGTCACCGAT ATCGAGGGCA CCACTCGGGA CGTGCTGCGC GAATATATCC ACATCGACGG CATGCCGCTG CACGTCATCG ATACCGCCGG CTTGCGCGAT ACGCCGGATG CCATCGAAAA GATCGGCGTG GCGCGTGCCT GGGAGGAAAT CGAGAAGGCC GATCGGGTGC TGCTGCTGGT CGATGCGACG ACCACGACAC AGACCGACCC GATGCAACTC TGGCCCGAAT TCGTCGCGCG CCTACCGCAT CCCGAGCGCC TCACCCTGGT GCGCAACAAG ATCGACGAGA GCGGCGAAAC CGAGCAAAGC GACTTATCCA CATCCCCTCC GATCGTGCGG CTCTCCGCCA AGACCGGTCT GGGTGTGGAT AACCTGAAGG AGCATCTCAA GGCGGTGATG GGCTTCGACG CCACCACCGA AGGACGCTTC TCGGCCCGCC GTCGACATCT CGATGCCCTG GATCGCGCCG GCGACGCCCT CGACAACGGC ATCGCCCAGC TACGCGGCCA TGGCGCCGGC GAGCTGCTCG CCGAGGACCT GCGCGACGCA CAGCAGGCGC TGTCCGAGAT CACCGGCGAG TTCACCGCCG ATGACCTGCT CGGCGAGATC TTCGGCAGTT TCTGCATCGG GAAATGA
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Protein sequence | MTATPLYRQD TIAAIATPPG RGGVGIIRLS GPASRDLAER ILGHCPAPRH AHYGPFYDAD AQVLDEGIAL FFPGPHSFTG EDVLELQGHG GPVIMDLLLA RCVALGARLA RPGEFSERAF LNDKLDLAQA EAIADLIDAS SRAAAENALR SLQGEFSTRV SALVDKLIEL RMFVEAAIDF PEEEIDFLAD GKVAAMLQGA QETLGEVRAA AGQGALMREG MNVVIAGRPN AGKSSLLNAL TERDSAIVTD IEGTTRDVLR EYIHIDGMPL HVIDTAGLRD TPDAIEKIGV ARAWEEIEKA DRVLLLVDAT TTTQTDPMQL WPEFVARLPH PERLTLVRNK IDESGETEQS DLSTSPPIVR LSAKTGLGVD NLKEHLKAVM GFDATTEGRF SARRRHLDAL DRAGDALDNG IAQLRGHGAG ELLAEDLRDA QQALSEITGE FTADDLLGEI FGSFCIGK
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