Gene Csal_3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3181 
Symbol 
ID4028706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3546464 
End bp3547252 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID637968395 
Producthydroxypyruvate isomerase 
Protein accessionYP_575224 
Protein GI92115296 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.365148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGCT TTGCCGCCAA CCTGTCCATG ATGTTCAACG AGGAGCCCTT CATGGAGCGC 
TTCGCCGCGG CCGCCGCCTG CGGCTTCGAA GGGGTCGAGT TCCTGTTCCC CTATGCGTTC
GAGGCCGATG ACATCGCTGC CGAGTTGAGA CGTCATGGCT TGCAGCAGGC GCTGTTCAAC
CTGCCGCCGG GCGACTGGGA CGCCGGCGAG CGCGGCATCG CCGCCCTGCC GGGGCGCGAG
GCGGAGTTCC GCGACAGCGT CGAGACCGCG ATTCGTTACG CCCGGGCGCT GAACTGTCCG
CGCCTGCATG CCATGGCAGG GCTGGCCCCC GAGGATGTGG CACGGGAAAC ATGGCGCGAG
GTGTATCTGG AAAACCTGCG CCATGCCGCC CGCCGCCTCG CCGAACACGA CCTCGAATTG
CTGATCGAGC CCATCAATAC CCGCGACATG CCGGGATACT GCCTCAACCA TCAGGCCGAG
GGGCACGCCA TCGTGGCCGA ACTGGGCGAG CCCAACGTCA AGGTACAGAT GGATTTCTAC
CACACCCAGA TCATGGACGG GGACCTCTGG ACGACCTACC GGCGTCATCG CGCAGGGGTC
GGCCACATTC AGATCGCCGG CGTGCCCGAG CGTCACGAAC CCGATACCGG GGAAGTGAAT
TATCCGTGGC TTTTCCAACA GTTGGACGCA GACGGGTTCG AGGGCTGGAT CGGCTGTGAA
TACAAGCCCC GCGCCGGCAC CCGGGCGGGA CTGGGATGGT TCGAGGCGTG GAAACGGCCA
GCCGGCTAG
 
Protein sequence
MPRFAANLSM MFNEEPFMER FAAAAACGFE GVEFLFPYAF EADDIAAELR RHGLQQALFN 
LPPGDWDAGE RGIAALPGRE AEFRDSVETA IRYARALNCP RLHAMAGLAP EDVARETWRE
VYLENLRHAA RRLAEHDLEL LIEPINTRDM PGYCLNHQAE GHAIVAELGE PNVKVQMDFY
HTQIMDGDLW TTYRRHRAGV GHIQIAGVPE RHEPDTGEVN YPWLFQQLDA DGFEGWIGCE
YKPRAGTRAG LGWFEAWKRP AG