Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_3113 |
Symbol | |
ID | 4028754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 3468241 |
End bp | 3469074 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637968327 |
Product | diaminopimelate epimerase |
Protein accession | YP_575156 |
Protein GI | 92115228 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.534786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTGC ACTTCACCAA GATGCACGGG CTCGGCAACG ACTTCGTGGT GATCGACCTG ATCACCCAGC GGGCACGGCT CGACACCGAG CGCATTCGGC AACTCGCCGA TCGCCATGTC GGCATCGGGT TCGACCAACT GCTGCTCGTC GAGCCGCCGC GCGATCCGGA GATGGATTTT CGCTATCGCA TCTTCAACGC CGACGGCAAC GAAGTGGAGA ACTGCGGCAA TGGCGCCCGC TGCTTCGCGC GCTTTGTGCG CGATAATCGC CTGACCCACA AGCGCGAGAT TCGTGTCGAG ACCCAGGCCG GCCCCCTGAC CCTGCGCGTC GAGGATGACG AACGAATCCG CGTGGACATG GGCGTGCCAC GCTTTGCTCC CGAGGTCGTG CCCTTCGATG CCCCGGCCGA TGCCCCGGCG CACTGCCTGG AGGTCGATGG CGAGACCTGG GACATCGGCG CGGTCTCGAT GGGCAACCCG CACGCCGTAT TGCGTGTCGA CGACGTCGCG CAAGCACCGG TGGCGCGGCT CGGCCCGCTC ATCGAACGCC ATCCGCGCTT CCCTCGGGGC GTCAACGTCG GCTTCCTGCA GGTCGTCTCG CGTCACGAGG CTCGCCTGCG CGTCTTCGAG CGCGGCAGTG GCGAAACGCT CGCTTGCGGC ACCGGCGCCT GCGCGGCGGT GGCCCACGGT ATCCGCCGTG GCTGGCTCGA GAGCCCGGTC GACGTGCACC TGCCCGGCGG CACGCTGACC CTGGCCTGGC CCGCGCCGGA TGCGTCCCTG ATGATGACCG GCCCGGCCAC GAGCGTCTTC GAAGGACGTA TCGCGTTGCC CTGA
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Protein sequence | MLLHFTKMHG LGNDFVVIDL ITQRARLDTE RIRQLADRHV GIGFDQLLLV EPPRDPEMDF RYRIFNADGN EVENCGNGAR CFARFVRDNR LTHKREIRVE TQAGPLTLRV EDDERIRVDM GVPRFAPEVV PFDAPADAPA HCLEVDGETW DIGAVSMGNP HAVLRVDDVA QAPVARLGPL IERHPRFPRG VNVGFLQVVS RHEARLRVFE RGSGETLACG TGACAAVAHG IRRGWLESPV DVHLPGGTLT LAWPAPDASL MMTGPATSVF EGRIALP
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