Gene Csal_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3108 
Symbol 
ID4028749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3463490 
End bp3464245 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content68% 
IMG OID637968322 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_575151 
Protein GI92115223 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.917277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGC CGCCGCGCAT CGTGGTGACA CGGCCCGGCG AGGGTGGCCG GCGCCTCGTC 
GATGCCTTGT CGACGGCGGG CTTCGAGGCC GTTCATCCGG CTCTGATGAC ACTGCAGCCG
CTCGCGGCCG ACGAGGTCGA GCGCGGTGCC GTGCTGGATT TCGACCTCTA CGACGTCGTG
GTCGTGACCA GCCCCTTCGC GGCGGAGTGC CTGGACGAGT GGATCGACCG GTATTGGCCG
CAGCTGCCTC AGGGGCCACG TTTCTATGCC GTGGGCGCGA GCACGGCGGC CACGCTGCAC
CGGACGCTGG GCATCAAGGC GAAAGTGCCC GATCCTGCCA GGGGCACGAC CAGCGAGGCG
CTGCTGGCGA TGCGTTCGCT GACGCGGCTC GACGGTCAGC GCGCCCTGAT CGTCGGGGGA
TCGGGCGGAC GCCAGGTCAT GGCGGAGGCC CTCGAGGCAC GCGGTGCCCG CGTCGCCAAG
CTGGCGCTCT ATCGGCGCGT TTACACCGCG CCCGACGAGG TGACCGTCGA CTGGTTGGCC
TCGGGGGCCT TCACGGCCAT GATCGTGACC AGTGGCGAAC TGCTCGAGCA TCTGGTTAGC
TGGTGCGGAC AAGCGGCGTT GAACAAACCG CTAATCGTTT CCAGTCAGCG TTTGGCTACA
CTGGCAGACA CGATGGGCTT CGCTTCGCCG CACGTCGCGA GTGGCGCGAC GCCCGATGCC
TTGGTGACCG CCGTACAGGA AGTAGGCGAT GCGTGA
 
Protein sequence
MSTPPRIVVT RPGEGGRRLV DALSTAGFEA VHPALMTLQP LAADEVERGA VLDFDLYDVV 
VVTSPFAAEC LDEWIDRYWP QLPQGPRFYA VGASTAATLH RTLGIKAKVP DPARGTTSEA
LLAMRSLTRL DGQRALIVGG SGGRQVMAEA LEARGARVAK LALYRRVYTA PDEVTVDWLA
SGAFTAMIVT SGELLEHLVS WCGQAALNKP LIVSSQRLAT LADTMGFASP HVASGATPDA
LVTAVQEVGD A