Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_3078 |
Symbol | |
ID | 4028884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 3428729 |
End bp | 3429478 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637968292 |
Product | triosephosphate isomerase |
Protein accession | YP_575121 |
Protein GI | 92115193 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.417746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCACGC CGCTGATCGC GGGCAATTGG AAGATGAACG GTTCGAGCGC CCTGGTCGAC GCGTTCGGCC AGGCCTTTGC CGATGCCGAC CTTCCCGAGT CGGTGGAAGT CGTGGTGCAT CCACCGTTCC CCTATCTCGA TGCGGCGCGC CGGGCTCTGG CCGGCGGGCC CGTCAAGCTC GGGGCGCAGA CGCTCAACCC CCTGCATGCG GGAGCGCGCA CGGGTGAGGT CAGTGGGCGC ATGCTCAAGG AATTCGACGT CGAGTACGTC CTGGTCGGGC ACTCCGAGCG CCGCGAGCTC TATCGCGAAA GCGACGACGA CGTTTATGAC CGGCTGTTGG CGGCCCTGAA TGCCGACCTG CGGCCGATCC TGTGTGTCGG CGAGACGCTC GAGGCACGCG ATGCCGGGCG TACGCGCGAT GTCGTGCTGC GCCAGGTCGG ACATGCGCTG GCGCCCCTGG AACCCGCGCA ACGGGCCCGC GTAACGATCG CCTACGAGCC CGTCTGGGCC ATCGGCACCG GGCGTACCGC GACGCCCGAA CAGGCACAAG AGGTCATGGC CGCGATCCGC GAGTACCAGG CCGGCTTCGA TCCTGCCCTG GCCCAGTCGA TGCGACTGAT CTACGGGGGC AGCATGAACG CGGCCAACGC GGCCGAACTT CTGGCCCAGC CGGATATCGA CGGCGGCCTG GTGGGCGGTG CTTCGCTCAA GGTCGACGAT TTTCTAGCCA TCTGTCATTC AGCAAGGTAG
|
Protein sequence | MRTPLIAGNW KMNGSSALVD AFGQAFADAD LPESVEVVVH PPFPYLDAAR RALAGGPVKL GAQTLNPLHA GARTGEVSGR MLKEFDVEYV LVGHSERREL YRESDDDVYD RLLAALNADL RPILCVGETL EARDAGRTRD VVLRQVGHAL APLEPAQRAR VTIAYEPVWA IGTGRTATPE QAQEVMAAIR EYQAGFDPAL AQSMRLIYGG SMNAANAAEL LAQPDIDGGL VGGASLKVDD FLAICHSAR
|
| |