| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_3052 |
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| Symbol | |
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| ID | 4028048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 3401149 |
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| End bp | 3402306 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637968264 |
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| Product | twitching motility protein |
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| Protein accession | YP_575095 |
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| Protein GI | 92115167 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.316107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCGC ATGAATGGCT GACGCAACTG CTGGATATCA TGCTCGACAA GCAGGCCTCC
GATCTGCTCG TGTCCACGGG GGCGCCGCCG AGTCTCAAGA TCGATGGCGC ACTGGTCACG
CTGGGAGACA AGGCGATGTC GGTGGGGCAA GTGCGTGAAC TGGTCTCGGC GGCGCTGCCT
CAGGGGGTAC GCGAACGCTT CGAGGCCGAG CGCGAGGCCA ACTTTGCGCT CAGCGTGCCG
GGCAAGGGGC GCTTTCGTGT CAGCGCCTTC TACCAGCGTA GCCAGATGGC GATGGTCGTG
CGGCGCATCG CCTACGATAT CCCCGACCTG GAAAGCCTGG CCCTGCCCTC GGCGCTGGGG
GAACTGGTCA ATCGTCAGCG TGGTTTGGTA TTCATCGTCG GCGGCACGGG AAGCGGCAAG
TCGACGACGC TGGCGTCGAT GATCCAGCAT CGCAACCAGA CCACCGGGGG GCACGTGATC
AGCATCGAGG ACCCCATCGA GTACATTCAC CCTCACGGGC GGGCGATCAT CAACCAGCGG
GAAGTGGGCA TCGATACCGA GTCCTTCGAG GTGGCGCTCA AGAATGCGCT GCGCCAGGCG
CCGGACGTGA TCCTGATCGG CGAGGTTCGT TCGCGCGAAG TCATGGAGCA TGCCCTGACC
TTTGCCGAAA CCGGGCATCT GTGCCTGGCG ACGCTGCATG CCAATAACGC CAACCAGGCC
CTGGAGCGCA TTCAGCACTT CTTTCCCAGC GAGCGCCACG AACAGGTGTG GATGGACCTT
TCGCTCAACC TGCAGGCCAT CGTCGCGCAG CGTCTGTTGC CTCGCGAGGA TGGCGAGGGG
CGGTGCGCGG CCGTCGAGGT GATGCTGCGC TCGCCGCTGA TCAGCGACCT GATTCGCAAG
GGAGCGATTC ACGATATCAA GGAGGTCATG CAGCGCTCAC GGGATCAGGG CATGCAGACC
TTCGACCAGG CCCTGTACGC GCTCTACCGA CAAGGGCGGA TCAGCGAAAA GATGGCGCTG
GTGCATGCCG ATTCCGCCAA CGACCTGCGT CTGCAAATCG CCTATGGCGA TGCCGAGAGC
CCGCAACTGG CGAGGGCTGC CGATGCCGCC GAGCGCTTCA CCCTGAAAGG CGATGACGAG
TGGCGCGAGG ATGAGTGA
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| Protein sequence | MTPHEWLTQL LDIMLDKQAS DLLVSTGAPP SLKIDGALVT LGDKAMSVGQ VRELVSAALP
QGVRERFEAE REANFALSVP GKGRFRVSAF YQRSQMAMVV RRIAYDIPDL ESLALPSALG
ELVNRQRGLV FIVGGTGSGK STTLASMIQH RNQTTGGHVI SIEDPIEYIH PHGRAIINQR
EVGIDTESFE VALKNALRQA PDVILIGEVR SREVMEHALT FAETGHLCLA TLHANNANQA
LERIQHFFPS ERHEQVWMDL SLNLQAIVAQ RLLPREDGEG RCAAVEVMLR SPLISDLIRK
GAIHDIKEVM QRSRDQGMQT FDQALYALYR QGRISEKMAL VHADSANDLR LQIAYGDAES
PQLARAADAA ERFTLKGDDE WREDE
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