Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_3018 |
Symbol | |
ID | 4028984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 3359140 |
End bp | 3359940 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637968224 |
Product | cytochrome c assembly protein |
Protein accession | YP_575061 |
Protein GI | 92115133 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00647598 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCGC TGCCTTTTGC GATTCTCGCC ATTGTCTGTT ATCTCGCCGC AGGAAGCTGG CAAGCACTGG CGCTCGCCAG GCGCGTGGCG CCCCGAGCGG CGCTCGTGCG CTCGCTGGGC CTGCTTGCGG TCAGCGCGCA CGCCGTGGTC GTGGCCCACA GCGTCTTTCT CGGTCACGGA CTGCATCTGG GGCTGTTCGA GAGCGCATCG CTGTTCAGCT GGCTGATCGC GGCGCTGTTG ATCGCCGTCA GCCTGCTCAA GCCGTTATTG AGCGTCGGAG CCGGTCTCTT TCCACTGGCG GCGCTGACCC TGATCGCGCT GATGCTGTTC CCCAGCCACA TGGTCGAGGC CAACGTCTCG CCCGGCATCG TCTTTCATAT CCTGACGTCG AGCGTGGCCT CGGCATTGCT CAGCATCGCC GCCGTGCAAG CCATGCTGGT CGCGCTGCAG AATCACGCAC TCAAGCGCCG GCATACGCGC GGCATCGTCC AGGTGCTGCC TGCCCTGACC AGCATGGAAC GCCTGCTGTT CGAGCTGATC GGCGCCGGCC TGCTGCTGCT CACCGCGGCG ATCGTCAGCG GCTTCATCTT CATCGACAAC CTGTTCGCGC AGCATCTCGT GCACAAGACG GTGTTCTCGC TGGCCGCCTG GATGGTCTTC ACCGGCCTGC TCATCGGGCG TCACTGGCTG GGCTGGCGCG GCGCGCGCGC CGTGCGCTGG ACGCTGGGCG GCTGCCTGCT GCTGGTGCTC GGCTACTTCG GCACCAAGGT CGCGCTGCAG CTCGTCTTCC ACGACGTGTG A
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Protein sequence | MQALPFAILA IVCYLAAGSW QALALARRVA PRAALVRSLG LLAVSAHAVV VAHSVFLGHG LHLGLFESAS LFSWLIAALL IAVSLLKPLL SVGAGLFPLA ALTLIALMLF PSHMVEANVS PGIVFHILTS SVASALLSIA AVQAMLVALQ NHALKRRHTR GIVQVLPALT SMERLLFELI GAGLLLLTAA IVSGFIFIDN LFAQHLVHKT VFSLAAWMVF TGLLIGRHWL GWRGARAVRW TLGGCLLLVL GYFGTKVALQ LVFHDV
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