Gene Csal_3018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3018 
Symbol 
ID4028984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3359140 
End bp3359940 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content66% 
IMG OID637968224 
Productcytochrome c assembly protein 
Protein accessionYP_575061 
Protein GI92115133 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00647598 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCGC TGCCTTTTGC GATTCTCGCC ATTGTCTGTT ATCTCGCCGC AGGAAGCTGG 
CAAGCACTGG CGCTCGCCAG GCGCGTGGCG CCCCGAGCGG CGCTCGTGCG CTCGCTGGGC
CTGCTTGCGG TCAGCGCGCA CGCCGTGGTC GTGGCCCACA GCGTCTTTCT CGGTCACGGA
CTGCATCTGG GGCTGTTCGA GAGCGCATCG CTGTTCAGCT GGCTGATCGC GGCGCTGTTG
ATCGCCGTCA GCCTGCTCAA GCCGTTATTG AGCGTCGGAG CCGGTCTCTT TCCACTGGCG
GCGCTGACCC TGATCGCGCT GATGCTGTTC CCCAGCCACA TGGTCGAGGC CAACGTCTCG
CCCGGCATCG TCTTTCATAT CCTGACGTCG AGCGTGGCCT CGGCATTGCT CAGCATCGCC
GCCGTGCAAG CCATGCTGGT CGCGCTGCAG AATCACGCAC TCAAGCGCCG GCATACGCGC
GGCATCGTCC AGGTGCTGCC TGCCCTGACC AGCATGGAAC GCCTGCTGTT CGAGCTGATC
GGCGCCGGCC TGCTGCTGCT CACCGCGGCG ATCGTCAGCG GCTTCATCTT CATCGACAAC
CTGTTCGCGC AGCATCTCGT GCACAAGACG GTGTTCTCGC TGGCCGCCTG GATGGTCTTC
ACCGGCCTGC TCATCGGGCG TCACTGGCTG GGCTGGCGCG GCGCGCGCGC CGTGCGCTGG
ACGCTGGGCG GCTGCCTGCT GCTGGTGCTC GGCTACTTCG GCACCAAGGT CGCGCTGCAG
CTCGTCTTCC ACGACGTGTG A
 
Protein sequence
MQALPFAILA IVCYLAAGSW QALALARRVA PRAALVRSLG LLAVSAHAVV VAHSVFLGHG 
LHLGLFESAS LFSWLIAALL IAVSLLKPLL SVGAGLFPLA ALTLIALMLF PSHMVEANVS
PGIVFHILTS SVASALLSIA AVQAMLVALQ NHALKRRHTR GIVQVLPALT SMERLLFELI
GAGLLLLTAA IVSGFIFIDN LFAQHLVHKT VFSLAAWMVF TGLLIGRHWL GWRGARAVRW
TLGGCLLLVL GYFGTKVALQ LVFHDV