Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_3017 |
Symbol | |
ID | 4028983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 3357500 |
End bp | 3358924 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637968223 |
Product | signal recognition particle subunit FFH/SRP54 (srp54) |
Protein accession | YP_575060 |
Protein GI | 92115132 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0662869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAA GTTTGACCGA GCGCCTGTCG GGCACGCTCA AGTCGATCAC CGGTCAGGCC AAGCTGACCG AGGACAACAT CAAGGATACC CTGCGCGAGG TACGTCGTGC ACTGCTGGAG GCCGATGTGG CCCTGCCGGT GGTCAAGGCG TTCGTCGAGC GGGTGCGCGA GCGTGCCGTG GGTCAGGAAG TTTCCCGCAG CCTGTCGCCG GGCCAGCAGT TCGTCAAGAT CGTCCAGCAG GAGCTGGAAG CGATCATGGG CGAAGCCAAC GAAGCGTTGT CGCTCAAGAG TTCGCCCTCG GTCATTCTGA TGGCCGGCTT GCAGGGCGCG GGCAAGACGA CTTCGGTTGC CAAGCTGGCG CGCTTCCTGC GCGAGCGGGA AAAGAAAAAA GTGCTGGTGG TCTCCGCCGA CGTCTATCGT CCCGCGGCCA TCGATCAGCT CGAGACGCTG GCCAACGAGG TGGAGGTCGA CTTCTTCCCG TCGACCAGCG CGCAGCGGCC GGTGGAGATT GCCCAGGCGG CGATCAAGCA CGCCAAAATC CAGTTTCATG ACATCGTGAT CGTGGACACC GCCGGCCGGT TGTCCGTCGA TCAGGCCATG ATGGAAGAAA TTCAGGCGCT GCATGGCGCG ACCACGCCGG ACGAGACGCT GTTCGTGGTC GATGCGATGA CCGGCCAGGA TGCGGCGAAC ACCGCCCAGG CCTTCCACGA GGCGCTGCCG CTGACCGGGG TGATTCTCAC CAAGGCGGAC GGCGATGCGC GTGGCGGGGC GGCGCTCTCC GTGCGCCACG TCACCGGCAA GCCGATCAAG TTCATGGGCA TGGGCGAGAA GGTCGACGCC CTGGAGCCCT TCCATCCGGA TCGCGTGGCG TCGCGGATTC TCGGCATGGG CGACATGCTG TCGCTGATCG AGGAGGCCGA GCGCAGCGTC GACGAGGACA AGGCGGCGAA GCTGGCCAAG AAGGTCAAGA AGGGCGACGG CTTCGACCTC GAGGACTTCC GTGACCAGCT GCAGCAGCTC AAGAAGATGG GCGGCATGGG CGGCTTGATG GGCAAGTTGC CGGGCATGGG GCAGATGGCC GAGGCCGCGC AAAGCCCCGG TGCCGAGAAG GAACTGGGCA AGCTCGAGTC GCTGATCAAC TCGATGACGC CGAAGGAGCG CCGCAAGCCG GAGATCATCA ATGGCTCGCG CAAGCGCCGC ATCGCGGCGG GGGCGGGGCT GCAGGTGCCC GATCTCAATC GTCTGCTCAA GCAGCACAAG CAGATGCAGA AGATGATGAA GAAGGTCGGC AAGAAAGGCG GCATGCAGAA AATGATGCGC GGGATGGCCG GCATGGGCGG TGGCCCCGGC GGGCCCGGCA TGGGTGGCCC GGGAATGGGC GGCCCCGGCA TGGGCGGTGG TCCCGGCGGC TTTCCGCGCC GCTGA
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Protein sequence | MFESLTERLS GTLKSITGQA KLTEDNIKDT LREVRRALLE ADVALPVVKA FVERVRERAV GQEVSRSLSP GQQFVKIVQQ ELEAIMGEAN EALSLKSSPS VILMAGLQGA GKTTSVAKLA RFLREREKKK VLVVSADVYR PAAIDQLETL ANEVEVDFFP STSAQRPVEI AQAAIKHAKI QFHDIVIVDT AGRLSVDQAM MEEIQALHGA TTPDETLFVV DAMTGQDAAN TAQAFHEALP LTGVILTKAD GDARGGAALS VRHVTGKPIK FMGMGEKVDA LEPFHPDRVA SRILGMGDML SLIEEAERSV DEDKAAKLAK KVKKGDGFDL EDFRDQLQQL KKMGGMGGLM GKLPGMGQMA EAAQSPGAEK ELGKLESLIN SMTPKERRKP EIINGSRKRR IAAGAGLQVP DLNRLLKQHK QMQKMMKKVG KKGGMQKMMR GMAGMGGGPG GPGMGGPGMG GPGMGGGPGG FPRR
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