| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2997 |
|---|
| Symbol | lysS |
|---|
| ID | 4028963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 3333942 |
|---|
| End bp | 3335450 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637968204 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_575041 |
|---|
| Protein GI | 92115113 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACC AAGACGCCGC TCAACACGAC GAGAATCATC TGATCGCGGA ACGCCGTGCC
AAGCTGGCGG CGCGCCGCGA CCAAGCCGCG GAAGCCGGGG GCAGCGCCTT TCCCAACGAC
TTTCGCCGCG ACAGCCTCGC CGCCGAACTT CAGGCCGAGC TGGGCGACAA GGACAAGGCC
GAGCTGGAAA CGCTCGACCG CCGGGCCTCG GTGGCCGGGC GCATCATGCG CAAGCGCGGG
CCCTTCATCG TCATTCAGGA CGTCTCCGAC CAGATCCAGC TCTACGTCGA CAAGAAAGGG
CTGCCCGCGG AGACCCTCGA CGACATCAAG AGCTGGGATA TCGGCGACAT CGTCGCGGCC
CGCGGGCCGG TGCACAAGTC CGGCAAGGGT GACCTCTACG TCATGATGGG CGAGGCGCAA
CTGCTGACCA AGAGCCTGCG TCCCCTGCCC GACAAGTACC ACGGCCTGAC CGATACCGAG
GCCCGCTACC GCCAGCGCTA TGTCGACCTG ATCATGAACC CCGAGTCGCG TCGCGTCTTC
GAGGTGCGTT CGCGTGTAAT CAGCGGCATT CGGCGTTTTC TGGTCGAGCG CGGCTTCATG
GAAGTCGAGA CGCCGATGCT GCAGCAGATT CCCGGCGGCG CCACGGCAAG GCCTTTCGTC
ACGCATCACA ACGCGCTGGA TATCGACATG TACCTGCGCG TCGCCCCCGA GCTGTATCTC
AAGCGCCTGG TCGTCGGTGG CTTCGAGCGG GTCTTCGAGA TCAACCGCAA CTTCCGCAAC
GAGGGATTGT CGACCCGTCA CAATCCCGAG TTCACGATGC TCGAGTTCTA CTGGGCCTAC
GCCGATTACC GTGACCTGCT GGATCTCACC GAAGCGATGA TTCGCGACGT CGCGCACGAG
GTGCTGGGCA CGACCACGGT CGAGTATCAG GGGGCACGCT ACGAACTCGG CGAGCCGTTC
CAGCGGCTCA CGCTGCGGCA GTCGATCCTC GAGTACGGCG ACGGTCTCGG CGAAAGCGAC
ATCGACACGT TCGATGGCGC GCGTGCCACC TGCGAGCGTC TGGGCATTCC CGTCAAGCCG
AGCTGGGGGC TGGGCAAGTT GCAGACCGAG ATCTTCGAGG CCGTCGCCGA AGACAAGCTC
GACCGCCCGA CGTTCATTAC CGAATACCCG GCCGAGGTCA GTCCGCTGGC GCGGCGCAAC
GATACCAATC CCCATGTGAC CGATCGCTTC GAGTTCTTCG TCGGCGGCCG CGAGCTCGCC
AATGGCTTCT CGGAGCTCAA CGACGCCGAG GACCAGGCCG AACGCTTCGC CGCCCAGGCG
GCGGAGAAGG ATGCCGGCGA CCTCGAGGCG ATGTACTACG ATGCCGACTA CGTACGCGCG
CTGGAGTACG GCATGCCGCC GACCGCGGGT GAGGGGATCG GCATCGACCG GCTGGTCATG
CTGCTCACCG ATAGCCCGTC GATCCGGGAT GTGTTGTTGT TCCCGGCGAT GCGTCCCTCG
GCCGACTGA
|
|---|
| Protein sequence | MANQDAAQHD ENHLIAERRA KLAARRDQAA EAGGSAFPND FRRDSLAAEL QAELGDKDKA
ELETLDRRAS VAGRIMRKRG PFIVIQDVSD QIQLYVDKKG LPAETLDDIK SWDIGDIVAA
RGPVHKSGKG DLYVMMGEAQ LLTKSLRPLP DKYHGLTDTE ARYRQRYVDL IMNPESRRVF
EVRSRVISGI RRFLVERGFM EVETPMLQQI PGGATARPFV THHNALDIDM YLRVAPELYL
KRLVVGGFER VFEINRNFRN EGLSTRHNPE FTMLEFYWAY ADYRDLLDLT EAMIRDVAHE
VLGTTTVEYQ GARYELGEPF QRLTLRQSIL EYGDGLGESD IDTFDGARAT CERLGIPVKP
SWGLGKLQTE IFEAVAEDKL DRPTFITEYP AEVSPLARRN DTNPHVTDRF EFFVGGRELA
NGFSELNDAE DQAERFAAQA AEKDAGDLEA MYYDADYVRA LEYGMPPTAG EGIGIDRLVM
LLTDSPSIRD VLLFPAMRPS AD
|
|---|
| |