Gene Csal_2995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2995 
Symbol 
ID4028961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3331925 
End bp3333310 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content68% 
IMG OID637968202 
Productmajor facilitator transporter 
Protein accessionYP_575039 
Protein GI92115111 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.35009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATCC GGCGCCTGTT CGTGACACGC CCGGGCGACG AAGGTTTGCC CGGCCCGCAG 
CGCCGCCACG CCATGCTGGT GATGGTGCTG GGCACGCTGA TGTCGGTGCT CGACAACGGC
ATCGTCAACA TCGCCTTGCC CACCCTGGCC AGCGAGCTGG CGGTGAGCGA GTCCCGCGCG
GTCTGGATCA CCAATATCTA TCAACTGGTG TGCGCGGCCC TGCTGCTGGG GTTTGCCGCC
CTGAGCCGTC TGGTCGGGCG GCGACGCCTG TATCTCGGCG GTCTGGCGCT GTTCGTGGTG
GCCTCGCTGT GCTGCGCCCT GTCGCGCAGT TTCGAGTGGC TGGTGGCGTC GCGCATGTTG
CAGGGTGTCG GTGCCGCCGC GATGCTGAGC ATCGGGCCTT CCATGTACCG ATTGATCTTC
CCGTCGCGTC TGCTGGGATC GGCGATCGGC ATGGGGGCCC TGGTGGTGGC CTTCGGCATC
GCCTTCGGAC CGTCGCTCGG CGGCATCATC CTGCACTTCG CCAGCTGGCC CTGGCTGTTC
GCCATCAATG TGCCGCTGGG ACTGCTGGCA CTGGTCCTGG GGCTGCGCGC CTTGCCCGGC
GAGCCCGCCC AGTCGCACGG TTTCGACTGG ACGGGCGCGG TGTTGTCGGT CGTGATGCTG
AGCGGGTTCG TGTTCTCCCT CGACCATATC GGTCATGGTG CGCGTGGCAT GAGTGCCTGG
CTGCCCCTGC TGATCAGCAC GCTCTGCCTG GTGCTGTTCG TGTGGCGTCA GCGCCGGGCG
GCCGCGCCAC TGGTACCGCT TGGCATGTTT CGTCAGGCAC GTTTCAGCAT CGCCGCGACG
GTGTCGTTGC TGGCCTTCGT GGCCCAGGGC ATCGCTTTCG TCGGGTTGCC GTTCATGTTC
CAGACCGTGA TGGGGGCGTC GCCGCTCGAG GCGGCCTTGT TGTTCACCCC CTGGCCCATG
GCGTTGATGT TGGTGGGGCC GCTCTCCGGG CGCCTCGCCG ACCGCTTCAA CCCGACGCTG
ATCTCGTCGT TGGGCTTGAT GATCTTCCTG CTGGGGATGT CGAGCCTGGC CACCTTGACC
GCCGACGCCG ACGCGCTGGC GATCGGCTGG CGTGCGGTGC TGTGCGGTGT CGGCTACGGG
CTGTTCCAGG CGCCCAACAA TCGCGAGATG ATCGGCAGCG TGACACTGGC CCATAGTGCC
AATGCCTCGG GGGTGCTGGC ATCGGTTCGC ACCTTCGGGC AGGCGCTGGG CACGGCCTCC
GTGGGCCTGA TGCTGGCACT CCCGGCGGCG TCCCTGACGC ATGCGCTATG GCTGGGCTGT
GTCAGCGTGG TGGCGGCGTT GGCGCTCAGC GTGTGGCGCA TCCCGCTGGC CCGCGTCCGC
GCCTGA
 
Protein sequence
MLIRRLFVTR PGDEGLPGPQ RRHAMLVMVL GTLMSVLDNG IVNIALPTLA SELAVSESRA 
VWITNIYQLV CAALLLGFAA LSRLVGRRRL YLGGLALFVV ASLCCALSRS FEWLVASRML
QGVGAAAMLS IGPSMYRLIF PSRLLGSAIG MGALVVAFGI AFGPSLGGII LHFASWPWLF
AINVPLGLLA LVLGLRALPG EPAQSHGFDW TGAVLSVVML SGFVFSLDHI GHGARGMSAW
LPLLISTLCL VLFVWRQRRA AAPLVPLGMF RQARFSIAAT VSLLAFVAQG IAFVGLPFMF
QTVMGASPLE AALLFTPWPM ALMLVGPLSG RLADRFNPTL ISSLGLMIFL LGMSSLATLT
ADADALAIGW RAVLCGVGYG LFQAPNNREM IGSVTLAHSA NASGVLASVR TFGQALGTAS
VGLMLALPAA SLTHALWLGC VSVVAALALS VWRIPLARVR A