Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2867 |
Symbol | |
ID | 4028669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 3198658 |
End bp | 3199170 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637968075 |
Product | peptide deformylase |
Protein accession | YP_574912 |
Protein GI | 92114984 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAGC TGACCATTCT CGAATTTCCC GACGAGCGCC TGCGCACCAA GGCCGCGCCC GTCGAGACCG TCGACGACGA GACGCGCAAG CTCGTCGACG ACATGCTAGA GACCATGTAC GACGCCCAGG GCATCGGATT GGCCGCCACG CAGGTCGACG TGCATCGTCG CGTCATCGTG ATGGATGTCA GCGATGATCG CTCGCAGCCG CGCGTGCTGA TCAATCCCGA ATACACGCCA TTGGGCGACG AACGCGAGCC GATGCAGGAA GGCTGCCTGT CGATCCCCGA GTATTATGCC GAAGTGCCGC GCGCCCTGCG CGTGTCGCTG AAGGCGCTGG ATCGCGATGG CAATCCCTAC GAGCTGGAGG CCGACGGCCT GCTCGCGCAC TGCATCCAGC ACGAATACGA TCATCTCGAA GGCGTGCTGT TCGTCGACTA CCTCTCGCCG CTCAAGCGCG ACCGGGTACT GAAAAAGATG CAGAAACGCC ACCGGGCCAT GCAAGACGCC TGA
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Protein sequence | MAKLTILEFP DERLRTKAAP VETVDDETRK LVDDMLETMY DAQGIGLAAT QVDVHRRVIV MDVSDDRSQP RVLINPEYTP LGDEREPMQE GCLSIPEYYA EVPRALRVSL KALDRDGNPY ELEADGLLAH CIQHEYDHLE GVLFVDYLSP LKRDRVLKKM QKRHRAMQDA
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