Gene Csal_2782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2782 
Symbol 
ID4028921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3114532 
End bp3115248 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content62% 
IMG OID637967990 
Productamino acid ABC transporter permease 
Protein accessionYP_574828 
Protein GI92114900 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACC TGCAGGGCTA CGGCCCCCGG CTTCTCGAAG GTGCCCTGGT CACGGTGGAA 
GTCGCCGTGC TGTCGTTGTT GCTGGCCCTG GTTCTGGGCC TGCTCACCGC CAGCGCCAAG
CTGTCTCGCC ACCGACTCTT GCACCGGATC GCCACGCTCT ATACCACCCT CATCCGCGGG
GTGCCCGACC TGGTATTGAT GCTGCTGCTG TTCTTCGGCG GCCAGATGGG CGTCAATGCC
ATCACCGACT GGCTGTATTA CCAGTTCGAT GTGGATATCT TCATCAACAT CAACGAATTC
GTCGCCGGCG TCGTCACCAT CGGCTTCATC TTCGGCGCCT ACATGGGCGA GACGTTCCGG
GGCGCCTTCC TCGCCGTCGA CAGCGGCCAG CTCGAGGCCG GACGCGCCTA CGGCATGTCC
AGCCGCCTCA TCTTTCGGCG CATTCAGTTT CCGCAAATGA TGCGTCACGC CCTTCCCGGC
CTGGGCAACA ACTGGATGGT ACTGCTCAAG ACCACGGCCC TGGTCTCCGT CATCGGGCTT
TCCGACATGG TGCGCATCGC TGCCGAGGCG ACCAAGGCCA CCCATGAACC CTTCCTGTTC
ATGATCCCGG TCGCCGTCAT CTATCTGCTG ATCGCGAGCG TGTCGGAGTG GGGCGTGGCG
CGACTGCAAA AACGCTATAA CGTCGGTTTC GGGGAGGCGG ACGAATGGAA CAACTGA
 
Protein sequence
MIDLQGYGPR LLEGALVTVE VAVLSLLLAL VLGLLTASAK LSRHRLLHRI ATLYTTLIRG 
VPDLVLMLLL FFGGQMGVNA ITDWLYYQFD VDIFININEF VAGVVTIGFI FGAYMGETFR
GAFLAVDSGQ LEAGRAYGMS SRLIFRRIQF PQMMRHALPG LGNNWMVLLK TTALVSVIGL
SDMVRIAAEA TKATHEPFLF MIPVAVIYLL IASVSEWGVA RLQKRYNVGF GEADEWNN