Gene Csal_2646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2646 
Symbol 
ID4028428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp2958073 
End bp2959836 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content67% 
IMG OID637967854 
Productphosphotransferase system, fructose IIC component 
Protein accessionYP_574692 
Protein GI92114764 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB 
TIGRFAM ID[TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00238741 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGA TCCTGATCAC GGCCTGCCCG AGCGGCGTGG CCACGACGTT CCTGGCGGCT 
CGGCGTCTCG AGCACGCGGC CCAGCGGCGC GGCTGGCAGG TCACGGTGGA AATGCATGGC 
GAGCTCGAAC CGCCGCAGCC TGTCTCGGAC GCGGCATTGC GCGATGCCGA CCTGGTGGTG 
GTGGCCGCCG ACCATGTGCC CGATGCCGCG CGCTTCACCG ACAAGCGACT GTTCCGGGCG 
CCGATCGCCG AGGCGCTGCC CGATCCCGAT GCCTTCCTGT CGCGCGCCGA ACGCGAGGCC 
GCCCCCTACA GTGGCGACGC GGCCGGCGCC GACACGAATG CCGCTCCCGC GGCGGGGGAG 
GCCCGGGGGA AGCGCATCGT GGCGGTGACG GCCTGTCCGA CCGGCGTCGC GCATACCTTC 
ATGGCCGCCG AAGCACTGGA AGACGCCGGG CGCAGCCTGG GGCATCACAT GCGCGTCGAG 
ACGCAAGGCT CGGTGGGCGC TCAGAACCAG CTGACCGAGG CGGAGATCGC CGACGCCGAC 
GTGGTGCTGC TGGCCTGTGA TATCGAAGTC GACGACGAAC GCTTCGCCGG CAAGCCTATC 
TATCGTACGT CCACGGGCAA TGCCCTCAAG AAGGCCAAGC CGACCATTGA GGAGGCGCTG 
GCCAATGCCG CCGTGGAGAG CCAGGCAACA GGGGCCGCGA ATGACGGCGG CAAGGCCAAG 
AGCGTCAAGG AGAAGGGCGT TTACAAGCAC TTGCTGACCG GGGTGTCGTT CATGCTTCCC 
ATGGTCGTCG CCGGCGGGTT GTGCATCGCA TTGTCGTTCG TGTTCGGCAT CCAGGCCTAC 
GAAGAAGAGG GCACGCTGGC CGCTGCCTTG ATGCAGATCG GTGGCGGAAC CGCCTTTGCC 
TTGATGGTGC CCGTACTGGC GGGCTACATC GCCTATTCGA TCGCCGATCG TCCCGGCATC 
GCGCCGGGCA TGATCGGCGG CATGCTCGCC AGCAACATCG GTGCAGGCTT CATCGGGGGG 
ATCCTCGCCG GCTTTCTCGC GGGGTACGCG GCGAAGGCGA TCACGCGCTA TCTCAAGCTG 
CCGGCGAGCG TGGAATCGCT CAAGCCGATC CTCATCATTC CGCTGCTGGC GAGTCTGTTG 
ACCGGTCTGG TGATGATCTA CGTGATCGGC ACGCCGGTGG CCAGTGTCCT CGATGCGCTG 
ACCAACTTCC TCAACGGCAT GGGGTCGACC AATGCCGTGC TGCTGGGGCT GTTGCTGGGC 
GGCATGATGT GCGTCGACAT GGGCGGGCCG GTCAACAAGG CGGCGTACAC CTTTGGCGTG 
GGCCTGCTGT CGAGCGAGAC CTATGCCCCC ATGGCGGCGA TCATGGCGGC GGGCATGGTG 
CCGCCACTGG CCATGGGGAT CGCCAGCATG CTGGCCAGGC ACAAGTTCGC CCAGAGTGAG 
CGTGAGGGCG GCAAGGCGGC CTTCGTGCTG GGGCTCTGCT TCATCACCGA AGGGGCCATT 
CCCTTCGCCG CCAAGGATCC ACTGCGGGTG CTGCCGGTCT GTATCGTCGG CGGCGCGGTG 
ACCGGGGCGC TGTCGATGTA TTTCGGCATC CAGCTGATGG CGCCGCATGG CGGGCTGTTC 
GTGCTGCTGA TTCCCAACGC GGTCAATCTC GCCCTGTTGT ATCTGCTCTG CATCGCGGTG 
GGAGCGGTGA TCGCCGGTGT GGCCTATGCC ATTATCAAGC CGGGTGCCTC CGCCGTGCCG 
GTGGCGGAAG GTGCCGCGTC CTGA
 
Protein sequence
MKAILITACP SGVATTFLAA RRLEHAAQRR GWQVTVEMHG ELEPPQPVSD AALRDADLVV 
VAADHVPDAA RFTDKRLFRA PIAEALPDPD AFLSRAEREA APYSGDAAGA DTNAAPAAGE 
ARGKRIVAVT ACPTGVAHTF MAAEALEDAG RSLGHHMRVE TQGSVGAQNQ LTEAEIADAD 
VVLLACDIEV DDERFAGKPI YRTSTGNALK KAKPTIEEAL ANAAVESQAT GAANDGGKAK 
SVKEKGVYKH LLTGVSFMLP MVVAGGLCIA LSFVFGIQAY EEEGTLAAAL MQIGGGTAFA 
LMVPVLAGYI AYSIADRPGI APGMIGGMLA SNIGAGFIGG ILAGFLAGYA AKAITRYLKL 
PASVESLKPI LIIPLLASLL TGLVMIYVIG TPVASVLDAL TNFLNGMGST NAVLLGLLLG 
GMMCVDMGGP VNKAAYTFGV GLLSSETYAP MAAIMAAGMV PPLAMGIASM LARHKFAQSE 
REGGKAAFVL GLCFITEGAI PFAAKDPLRV LPVCIVGGAV TGALSMYFGI QLMAPHGGLF 
VLLIPNAVNL ALLYLLCIAV GAVIAGVAYA IIKPGASAVP VAEGAAS