| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2631 |
|---|
| Symbol | |
|---|
| ID | 4028159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2943772 |
|---|
| End bp | 2944749 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637967839 |
|---|
| Product | sigma 28 (flagella/sporulation) |
|---|
| Protein accession | YP_574677 |
|---|
| Protein GI | 92114749 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
|---|
| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGC TGGAACGGGA TATTCAGGGT GTGGATCTCG ACGACGTCGA CAGCGAAATG
GAAGTCGATG CCGACGAGAT TGCCAACGAC AAGGAAGAGG AGGCATTCGA GAAGGCGTTG
CACCGCGACG ACAACACCTA TCATCAAAGC CTCGATGCGA CCCAGATCTA CCTCAACGAA
ATCGGCTTCT CGCCGCTACT GACCCCCGAA GAAGAAGTGC ATTACGGTCG GCTGGCTCAA
AAGGGCGATC CCGCCGGTCG ACAGCGCATG ATCGAGTCCA ACCTGCGTCT GGTGGTCAAG
ATCGCGCGCC GCTACCTCAA CCGTGGCCTG TCGCTGCTCG ACCTGATCGA GGAGGGCAAC
CTCGGCCTGA TTCGCGCCGT CGAGAAATTC GACCCCGAGC GCGGCTTTCG CTTCTCGACC
TACGCGACCT GGTGGATTCG CCAGACCATC GAGCGGGCCC TGATGAATCA GACGCGTACC
ATCCGTCTGC CGATTCACGT GGTCAAGGAG CTCAACATCT ACCTGCGCGC CGCCCGGGAA
TTGACGCAGC GGCTCGACCA CGAGGCCACT GCCGAGGAAA TCGCCGAGTT CCTCGACAAG
CCGGTGGGCA CGGTCAAGAA GATGCTGGGT CTCAACGAGC GAGTTTCCTC GGTCGACTAC
CCCATGGGCG GCGAAAGCGA CAAGCCGCTG ATCGATACCC TGGCGGACGA AAACGAGGCC
GGCCCCGAAT CCCTGCTGGT GGGCAACGAC GTCAAGCAGC ATGTCGACGA CTGGCTGGCG
GAGTTGACCG ACAAGCAGAT GGAGGTGGTG GTGCGCCGTT TCGGACTGCG TGGTCACGAG
GCCGCCACGC TGGAGGAAGT CGGCGAGGAA ATCGGCCTGA CGCGTGAACG GGTGCGCCAG
ATTCAGGTTG AGGCACTCAA GAAACTGCGT CGGGTGCTCG AGAAGCAAGG ATTGTCGCTG
GACTCGATCT TCGAATGA
|
|---|
| Protein sequence | MSMLERDIQG VDLDDVDSEM EVDADEIAND KEEEAFEKAL HRDDNTYHQS LDATQIYLNE
IGFSPLLTPE EEVHYGRLAQ KGDPAGRQRM IESNLRLVVK IARRYLNRGL SLLDLIEEGN
LGLIRAVEKF DPERGFRFST YATWWIRQTI ERALMNQTRT IRLPIHVVKE LNIYLRAARE
LTQRLDHEAT AEEIAEFLDK PVGTVKKMLG LNERVSSVDY PMGGESDKPL IDTLADENEA
GPESLLVGND VKQHVDDWLA ELTDKQMEVV VRRFGLRGHE AATLEEVGEE IGLTRERVRQ
IQVEALKKLR RVLEKQGLSL DSIFE
|
|---|
| |