| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2617 |
|---|
| Symbol | |
|---|
| ID | 4028145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2928196 |
|---|
| End bp | 2929458 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637967825 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_574663 |
|---|
| Protein GI | 92114735 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.573262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACCC GTGACATGCA GATTGCCGGT TTCGATGATG CCCTGTGGGA CGCCATGCAG
CAGGAAGTGG GCCGTCAGGA AGCGCACATC GAGCTGATCG CTTCCGAGAA CTATGCCAGC
CCGCGTGTCA TGCAGGCCCA GGGGACCCAG CTCACCAACA AGTACGCGGA AGGGTATCCC
GGCAAGCGTT ACTACGGTGG TTGCGAGCAT GTCGACGTCG TCGAGGACCT GGCGATTCAA
TATGCCAAGG AACTGTTCGG CGCGACCTAC GCCAACGTGC AGCCGCATTC CGGCTCCCAG
GCCAACGGCG CGGTGTTCCA GGCGCTGGTC AAGCCCGGTG ATACCGTGCT GGGCATGAGC
CTCGACGCAG GCGGTCACCT GACCCACGGC GCCAAGCCCA ACTTCTCCGG GAAGCATTAC
AACGCCGTGC AGTACGGTCT CGACGAAAAC GGCCTGATCG ATTACGACGA GGTCGCCCGT
CTGGCGCGCG AACACCAGCC GAAGATGATC ATCGCGGGCT TCTCGGCCTA TTCCCAGGTC
ATCGACTGGG CGCGCTTCCG CGAGATCGCC GATGACGTGG GCGCGTTCCT GCTGGTCGAC
ATGGCGCATA TCGCCGGTCT GGTGGCGGCA GGTGTCTACC CGAGCCCGCT GCCGCATGCC
CACGTGGTCA CCACCACCAC GCACAAGACC CTGCGCGGTC CGCGCGGTGG CCTGATTCTC
TCCGCCGAGA ACAACGCCGA GATCGAGAAG AAGTTCCAGT CCGCCGTGTT CCCCGGTAGC
CAGGGCGGTC CGCTGATGCA CGTCATCGCC GCCAAGGCGA TCTGCTTCAA GGAAGCGATG
GAGCCCGACT TCAAGGCCTA CCAGCAGCAG GTGATCGACA ATGCCAAGGC CATGGCCGGT
GTGTTCATCG AGCGCGGCTA TGACGTCGTC TCCGGCGGCA CCGAAGACCA CCTCTTCCTG
CTGTCGCTGG TCAAGCAGGG CCTGACCGGC AAGGATGCGG ACGCCGCCCT GGGTCGCGCC
CACATCACCG TCAACAAGAA CGCCGTGCCC AACGACCCGC AGAGCCCGTT CGTGACCTCC
GGGCTGCGTA TCGGCACGCC TGCCGTGACC ACACGCGGCT TCGGCGAGAG TGAATGCGCT
GACCTCGCCG GCTGGATCTG CGACATCCTC GACGCCATGC AGCAGGGCGA TGCCAGCCAG
GCCGAAGCCG ACGTCAAGGC CAAGGTCGAG GCCGTCTGCG CGCGCTTGCC GGTGTATCGC
TAG
|
|---|
| Protein sequence | MFTRDMQIAG FDDALWDAMQ QEVGRQEAHI ELIASENYAS PRVMQAQGTQ LTNKYAEGYP
GKRYYGGCEH VDVVEDLAIQ YAKELFGATY ANVQPHSGSQ ANGAVFQALV KPGDTVLGMS
LDAGGHLTHG AKPNFSGKHY NAVQYGLDEN GLIDYDEVAR LAREHQPKMI IAGFSAYSQV
IDWARFREIA DDVGAFLLVD MAHIAGLVAA GVYPSPLPHA HVVTTTTHKT LRGPRGGLIL
SAENNAEIEK KFQSAVFPGS QGGPLMHVIA AKAICFKEAM EPDFKAYQQQ VIDNAKAMAG
VFIERGYDVV SGGTEDHLFL LSLVKQGLTG KDADAALGRA HITVNKNAVP NDPQSPFVTS
GLRIGTPAVT TRGFGESECA DLAGWICDIL DAMQQGDASQ AEADVKAKVE AVCARLPVYR
|
|---|
| |