Gene Csal_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2616 
Symbol 
ID4028144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2926940 
End bp2927725 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID637967824 
ProductGntR family transcriptional regulator 
Protein accessionYP_574662 
Protein GI92114734 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.23468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTCCAT CATCTCTTTC CGCGTCGACG GCGCGCCCGG ATATCGCCGA GTCGTTGGCC 
GAGGCGATCT TCAGCGGTCG CTATGCTCCC GGCGACTTGA TACCCCGCGA ACTGGATCTT
TGCGAGACCT TCGGCGTCAG TCGCTCGACG GTACGTAGCG TCTTGCAGAA CCTGGTCTCG
GCGGGCTTGC TGGTGCGCAT TTCCGGACAG GGCACGCGGG TGCGGGAGTT GACTCAATGG
CACATGCTCG ACCCGCGTGT CACCGAATGG ATGGCGCGCT ACGCCGAGCC CAACCCGCGT
TTTCAGCGTG AAATATACGC CTTCCGTGTG GCGGTCGAGC CGTTCGTGGC GTTTCTGGCG
GCCAGCGCGG CGACGGCCAC CGACCTGCTG GCCATCGAAC AGGCCTACGA CGGCATGGCC
CGCAGCCTGG AGACGCCCGA TCACTGCTGG GAAGGGCGCT CGCACGACGA CTACGACGTG
GCGTTCCATG AAGCCATCTT CGCGGCCACC CACAACGTGG TGTGGACGCA GCTCAGCCAT
GTGCTGAGGC CCACGATCAC GGTGCTGGTC CAGCGCACCA ACCAGAGTGC CGACGAACTC
GCCGACAGCA TGGAGCGTCA TCGCCAGGTG ATGGAGGCGA TTCGTCTGCG TCAACCCGAG
CGGGCGCGCG CCTGTGCCCT GGCGGTGCTC GAACGCACGG GCCAGGATCT GGGCATCGAC
ACGGATCCGG CCTCGATGCC GGCGTTGGAT CCGGTTTTTT CTCATTGGCA AGGAGACCCC
TCGTGA
 
Protein sequence
MCPSSLSAST ARPDIAESLA EAIFSGRYAP GDLIPRELDL CETFGVSRST VRSVLQNLVS 
AGLLVRISGQ GTRVRELTQW HMLDPRVTEW MARYAEPNPR FQREIYAFRV AVEPFVAFLA
ASAATATDLL AIEQAYDGMA RSLETPDHCW EGRSHDDYDV AFHEAIFAAT HNVVWTQLSH
VLRPTITVLV QRTNQSADEL ADSMERHRQV MEAIRLRQPE RARACALAVL ERTGQDLGID
TDPASMPALD PVFSHWQGDP S