Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2421 |
Symbol | prpB |
ID | 4026941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 2724288 |
End bp | 2725169 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637967628 |
Product | 2-methylisocitrate lyase |
Protein accession | YP_574467 |
Protein GI | 92114539 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.467633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCATC CCAGCCCTGG TACCCGTTTT CGCGCTGCGC TCGACGCGCA TCGTCCCTTG CCGATCGTCG GCACCATCAA TGCCTATACG GCGCTCATGG CCGAAAAGGT CGGGCATCCC GCGATCTATC TTTCCGGGGG CGGCGTCGCC AATGCGTCCT TCGGGCTGCC GGATCTGGGC ATGACCACCA TGAACGATGT GGCCGAGGAT GCCCGCCGCA TCACGGGAGC CTCGGAGGCG CCGCTGCTGG TGGATATCGA TACCGGCTGG GGGGGAGCGT TCAATATCGC CCGCACGATC AAGGAAATGC AGCGCGCGGG AGTGGCGGCC GTGCACCTGG AGGACCAGGT CGCGCAGAAA CGCTGCGGTC ATCGGCCCAA CAAGGCCATC GTGTCGCAGC AGGAAATGGT GGATCGCATC AAGGCGGCGG CCGATGCGCG GCTGGACGAC GACTTCTACC TGATCGCACG CACCGATGCC TTCCAGAAAG AAGGACTGGG CGCTGCCATC GAGCGTGCCA ATGCCTGTCT CGAGGCCGGT GCCGATGCCA TCTTCGCCGA GGCCGTACAC AGTCTCGACG ATTACCGTGC GTTTTGTGCC GGGGTCAATG CGCCCATTCT CGCCAATATC ACCGAATTCG GCGCGACGCC CTTGTTCAGT CAGCAAGAGC TGGCCGATGT CGGCTGTCGC ATGGTGCTGT ACCCGCTGTC GGCGTTTCGT GCCATGAATG CCGCGGCGCT TTCGGTGTAC CGCAGCATTC GTGACAACGG CCATCAGCGC GATGTCGTCG ACAAGATGCA AACACGCGAA GAGCTGTACG AGTTTCTCGA CTATTACGCC TTCGAGCACA AGCTGGATGC CTTGTTCGAT CGGGAGAAAT AG
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Protein sequence | MSHPSPGTRF RAALDAHRPL PIVGTINAYT ALMAEKVGHP AIYLSGGGVA NASFGLPDLG MTTMNDVAED ARRITGASEA PLLVDIDTGW GGAFNIARTI KEMQRAGVAA VHLEDQVAQK RCGHRPNKAI VSQQEMVDRI KAAADARLDD DFYLIARTDA FQKEGLGAAI ERANACLEAG ADAIFAEAVH SLDDYRAFCA GVNAPILANI TEFGATPLFS QQELADVGCR MVLYPLSAFR AMNAAALSVY RSIRDNGHQR DVVDKMQTRE ELYEFLDYYA FEHKLDALFD REK
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