Gene Csal_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2421 
SymbolprpB 
ID4026941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2724288 
End bp2725169 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content62% 
IMG OID637967628 
Product2-methylisocitrate lyase 
Protein accessionYP_574467 
Protein GI92114539 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID[TIGR02317] methylisocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.467633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATC CCAGCCCTGG TACCCGTTTT CGCGCTGCGC TCGACGCGCA TCGTCCCTTG 
CCGATCGTCG GCACCATCAA TGCCTATACG GCGCTCATGG CCGAAAAGGT CGGGCATCCC
GCGATCTATC TTTCCGGGGG CGGCGTCGCC AATGCGTCCT TCGGGCTGCC GGATCTGGGC
ATGACCACCA TGAACGATGT GGCCGAGGAT GCCCGCCGCA TCACGGGAGC CTCGGAGGCG
CCGCTGCTGG TGGATATCGA TACCGGCTGG GGGGGAGCGT TCAATATCGC CCGCACGATC
AAGGAAATGC AGCGCGCGGG AGTGGCGGCC GTGCACCTGG AGGACCAGGT CGCGCAGAAA
CGCTGCGGTC ATCGGCCCAA CAAGGCCATC GTGTCGCAGC AGGAAATGGT GGATCGCATC
AAGGCGGCGG CCGATGCGCG GCTGGACGAC GACTTCTACC TGATCGCACG CACCGATGCC
TTCCAGAAAG AAGGACTGGG CGCTGCCATC GAGCGTGCCA ATGCCTGTCT CGAGGCCGGT
GCCGATGCCA TCTTCGCCGA GGCCGTACAC AGTCTCGACG ATTACCGTGC GTTTTGTGCC
GGGGTCAATG CGCCCATTCT CGCCAATATC ACCGAATTCG GCGCGACGCC CTTGTTCAGT
CAGCAAGAGC TGGCCGATGT CGGCTGTCGC ATGGTGCTGT ACCCGCTGTC GGCGTTTCGT
GCCATGAATG CCGCGGCGCT TTCGGTGTAC CGCAGCATTC GTGACAACGG CCATCAGCGC
GATGTCGTCG ACAAGATGCA AACACGCGAA GAGCTGTACG AGTTTCTCGA CTATTACGCC
TTCGAGCACA AGCTGGATGC CTTGTTCGAT CGGGAGAAAT AG
 
Protein sequence
MSHPSPGTRF RAALDAHRPL PIVGTINAYT ALMAEKVGHP AIYLSGGGVA NASFGLPDLG 
MTTMNDVAED ARRITGASEA PLLVDIDTGW GGAFNIARTI KEMQRAGVAA VHLEDQVAQK
RCGHRPNKAI VSQQEMVDRI KAAADARLDD DFYLIARTDA FQKEGLGAAI ERANACLEAG
ADAIFAEAVH SLDDYRAFCA GVNAPILANI TEFGATPLFS QQELADVGCR MVLYPLSAFR
AMNAAALSVY RSIRDNGHQR DVVDKMQTRE ELYEFLDYYA FEHKLDALFD REK