Gene Csal_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2408 
Symbol 
ID4026845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp2702965 
End bp2703945 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content64% 
IMG OID637967610 
ProductTRAP transporter solute receptor TAXI family protein 
Protein accessionYP_574454 
Protein GI92114526 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTCA AGACACAAGC CTTGACCGCC ACCCTCGCCG GGGCCATGTG CCTCGCCACC 
GCGGCGCAAG CCGATCGCGA GGATTGGCCG GACAACTTCA CCGTGGGCAC GGCCAGCCAG 
GGCGGGACCT ACTTCGTCTA CGGTTCCGGC TGGGCCAACT TGATCGCCGA CGAGCTGGGC 
GTTTCCGGCG GTGGCGAAGT CACCGGCGGC CCCAACCAGA ACCTGGCGTT GGTGCACACC 
GGTGAGCTGG CCCTCGGCCT CACCACCATG GGTCCGGCCG CCGAGGCCCT GGCCGGCGAG 
AGCCCGCTGG CACCCGGCGT GAAGATGGAC AACGTCTGTG CGCTGTTCCC GATGTACGAG 
ACGCCGTTCT CCATCACCAC CCTGGCCGAT AGCGGCATCG AGTCGATCTC CGATATTCCG 
GACGGTGCCA GCATCGGCTT CGGGCCGGCG GCCTCGACGT CCGATACGTA CTTCCCGGCC 
ATCCTCGAAG AGCTCGGCGT GGATTTCGAA CGCCGCAACG GCGGCTGGAG CGACCTGGGC 
GGACAGCTCC AGGACGGGCT GATCGACGTC ATCGCATTCG CCGCCGGGAT TCCGATTCCC 
GCCGTGAGCC AGCTTGAGGT GCAAACCGAT GTCAACATCA TCGAGTTCAC CGAAGAAGAG 
CAGCAGAAAG TTCTCGAGGC CTTCCCGGTC TCGCCGTTCC AGATTCCGGC CAGCACTTAC 
CAGACGCTCG AGGAAGATGC GCGCGCAGTG TCCATGTGGA ACTTCACCAT CGCCGGCTGT 
GACCTCCCCG AAGACTTTGT CTATGAGATC ACCAAGCTGA GCATGGAGAA CAACGACCGG 
ATGCGCGACA TTCACCGCAG CGCCGAGTTC AGCGTGCCCG AGAACCTCAA GTACAACACC 
GTGCTGCCGT TCCATCCGGG CGCCGTGCGT TGGTACGAAG AGAACGGCTA CGACATCCCG 
GAAGACCTGA AACTCGACTG A
 
Protein sequence
MSFKTQALTA TLAGAMCLAT AAQADREDWP DNFTVGTASQ GGTYFVYGSG WANLIADELG 
VSGGGEVTGG PNQNLALVHT GELALGLTTM GPAAEALAGE SPLAPGVKMD NVCALFPMYE 
TPFSITTLAD SGIESISDIP DGASIGFGPA ASTSDTYFPA ILEELGVDFE RRNGGWSDLG 
GQLQDGLIDV IAFAAGIPIP AVSQLEVQTD VNIIEFTEEE QQKVLEAFPV SPFQIPASTY 
QTLEEDARAV SMWNFTIAGC DLPEDFVYEI TKLSMENNDR MRDIHRSAEF SVPENLKYNT 
VLPFHPGAVR WYEENGYDIP EDLKLD