Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2313 |
Symbol | |
ID | 4026272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 2598828 |
End bp | 2600159 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637967518 |
Product | putative urea short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic protein precursor |
Protein accession | YP_574362 |
Protein GI | 92114434 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00688905 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCATTGGC GCTGCAACAA CAATCAGACC CGCAAGGAGT CGTTCGTGAA CAAGATCACC TCCACCGCCG CACTCTTACT CTCGATGGGC ATCGCGCTTC CGGCCGCGGC CCAGGAAGAC ACCATCAAGG TCGGGATCCT GCACTCTCTT TCCGGGACCA TGGCCATCAG TGAGTCGACG CTGAAGGATG AGCTGTTGAT GCTCATCGAG CAGCAGAACG AAAACGGCGG GTTGCTGGGC AAGCAGCTCG AACCCGTGGT GATGGATCCG GCCTCGGACT GGTCGCTGTA CGCCGAGCAG GCGCGCGACA TGCTCACCGG GGACGACCGG GTCGACGTGA TCTTCGGCAA CTGGACGTCG GCGTCGCGCA AGGCGGTGCT GCCGGTGGTC GAGGAAGAGA ACGGCCTGCT GTTCTATCCG GTGCAGTATG AGGGCGAGGA ATCGTCCGAG AACATCTTCT ATACCGGCGC GGCACCCAAC CAGCAGGCGA TTCCCGCGGT CGACTACCTG ATGAGTCAGG GCGTGGAGCG CTGGGCGCTG CTGGGTACCG ACTACGTCTA TCCGCGCACC ACCAACAAGA TTCTCGAGGC GTATCTCAAG GACCACGGCG TCGCCGACGA CGACATCATG GTCAATTACA CGCCGTTCGG CTTCAGCAAT TGGCAGTCGA TCGTCTCCGA GGTCAAGGAC TTCGGCAGCC AGGGCAAGCA GACCGCCGTG GTCTCGACCA TCAACGGCGA TGCCAACGTG CCGTTCTACA CCGAGCTTTC CAATCAGGGC ATCAGTGCCT CCGACATCCC GGTGGTCGCC TTCTCGGTGG GCGAGCAGGA ACTGTCCGGC ATCGATACCG GGCCGCTGGT GGGACACATG GCGGCGTGGA ACTACTTCAT GAGCGTCGAC AGCGACGCCA ATTACGACTT CATCGACAAC TGGGTCGAAT ACACCGGTGA CGACATGGCC GTGACCAACG ATCCCATGGA AGCGCACTAC ATCGGCTTCA ACATGTGGCT GGAGGCGGTG CGCGAGGCCG GCACCACCGA TGTCGACGCG GTGAAGGATT CGATCATCGG AGTCACGGTG CCCAACCTCT CCGGTGGCTC CTCGGCGATG ATGCCCAACC ATCACATCAC CAAGCCGGTG ATGATCGGCG AGATCCAGGA CGACGGTCAG TTCAGCGTGG TCTGGGAAAC CTCGGGCAAT GTCGCCGGCG ACGCCTGGTC CGACTATCTC CCCGAATCGC AGAACCTGAT CAGCGACTGG CGCGCGCCAC TGCGCTGCGG AAAGCTCAAC GTCGACACCA TGACCTGCGA GGACGGCGCT GGCGCCGAGT AA
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Protein sequence | MHWRCNNNQT RKESFVNKIT STAALLLSMG IALPAAAQED TIKVGILHSL SGTMAISEST LKDELLMLIE QQNENGGLLG KQLEPVVMDP ASDWSLYAEQ ARDMLTGDDR VDVIFGNWTS ASRKAVLPVV EEENGLLFYP VQYEGEESSE NIFYTGAAPN QQAIPAVDYL MSQGVERWAL LGTDYVYPRT TNKILEAYLK DHGVADDDIM VNYTPFGFSN WQSIVSEVKD FGSQGKQTAV VSTINGDANV PFYTELSNQG ISASDIPVVA FSVGEQELSG IDTGPLVGHM AAWNYFMSVD SDANYDFIDN WVEYTGDDMA VTNDPMEAHY IGFNMWLEAV REAGTTDVDA VKDSIIGVTV PNLSGGSSAM MPNHHITKPV MIGEIQDDGQ FSVVWETSGN VAGDAWSDYL PESQNLISDW RAPLRCGKLN VDTMTCEDGA GAE
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