Gene Csal_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2175 
Symbol 
ID4026669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2448830 
End bp2450062 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content65% 
IMG OID637967380 
Producttype II secretion system protein 
Protein accessionYP_574225 
Protein GI92114297 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.357882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTAG CGACACGTAG CAAGGCGCCA CGGCGCGTCG TCCTGCATCG CTGGCGATGG 
AAGGGCAAGA ATTCCCGTGG CGAGACCATC CAGGGCGAGC TGGTGGCGGC AGATGAAATG
ACGGTGCGCC AGGAGCTCGG CCGCCAGAAC ATTCTGGTCA AGCGCATCCA GCGCGTGCGC
AGCCCCTTCG GCATCGGCCG CATACGCCCC CAGGACATCA CCCTGTTCGC ACGGCAGATG
GCGACGATGA TCCGTGCCGG CATCCCGCTG CTGCAAGCCT TCAGCGTGGT GTCGGAGAGT
CTCAAGCGCC CCGCCATGCA CCACCTCATC GAGACCTTGA TGAACGAAGT CTCGGCGGGG
GCCAGCTTCT CCGAGGCGCT GGCCCAGCAT CCGCAGCATT TCGATCGCAT GTTCGTCAAC
ATGGTCGAGG CCGGCGAGCA GTCGGGATCG CTGGATCGCA TGCTGGAGCG GGTGGCGAGC
TACAAGGAAA AGATCGACTC CCTGCGCGCG CGCGTGCGCA AGGCCCTCTA TTACCCCGCC
GCCGTGGTCC TGGTGGGCAT GGGGGTCACC GCCTTGCTGC TGGTCAAGGT CGTACCTCAG
TTCGAGAGCC TGTTTCGCGG CTTCGGCGCC GACTTGCCCG CCTTCACGCA GTTGACCATT
GCGCTGTCGC AGTGGGTCCA GGCGTACTGG CCGCACCTGC TCGGCGCCTT CATCGCTGCC
TTGCTGCTGG TCCGTCTCGG CATCCGTCGC TCGCCGGGCT TCGCCTACCG TGCCGATGCG
CTCATGCTGC GCCTGCCGGT CATCGGCGAC ATTCTGGACA AATCGTCGGT GGCGCGCTTT
TCGCGCACCC TGGCGACGAC CTTCAGCGCC GGGGTGCCAC TGGTCGAATC GCTCAACACC
GCAGCCGGCT CCACCGGCAA TCGGGTCTAC CAACGCGCCA TCGGCGAGGT CCGCGAGCAT
GTCGCCAGCG GCCAGCAGCT CAACTTCGCC ATGCGTGCCA CCGGGCGCTT CCCCAACCTG
GCGGTGCAGA TGATTGGCGT GGGCGAAGAA TCCGGTGCGC TGGACGCCAT GCTCAACAAG
GTGGCGGATT TCTACGAGGA AGACGTCGAT ACCAAGGTCG ACGCGCTGAC ATCGCTGCTC
GAACCCTTCA TCATCGTGGT GCTGGGCGTA CTGGTCGGCG GCCTCGTCGT CTCGATGTAT
CTGCCGATCT TCGAAATGGG CTCGGCCATT TGA
 
Protein sequence
MAVATRSKAP RRVVLHRWRW KGKNSRGETI QGELVAADEM TVRQELGRQN ILVKRIQRVR 
SPFGIGRIRP QDITLFARQM ATMIRAGIPL LQAFSVVSES LKRPAMHHLI ETLMNEVSAG
ASFSEALAQH PQHFDRMFVN MVEAGEQSGS LDRMLERVAS YKEKIDSLRA RVRKALYYPA
AVVLVGMGVT ALLLVKVVPQ FESLFRGFGA DLPAFTQLTI ALSQWVQAYW PHLLGAFIAA
LLLVRLGIRR SPGFAYRADA LMLRLPVIGD ILDKSSVARF SRTLATTFSA GVPLVESLNT
AAGSTGNRVY QRAIGEVREH VASGQQLNFA MRATGRFPNL AVQMIGVGEE SGALDAMLNK
VADFYEEDVD TKVDALTSLL EPFIIVVLGV LVGGLVVSMY LPIFEMGSAI