Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2175 |
Symbol | |
ID | 4026669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 2448830 |
End bp | 2450062 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637967380 |
Product | type II secretion system protein |
Protein accession | YP_574225 |
Protein GI | 92114297 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.357882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGTAG CGACACGTAG CAAGGCGCCA CGGCGCGTCG TCCTGCATCG CTGGCGATGG AAGGGCAAGA ATTCCCGTGG CGAGACCATC CAGGGCGAGC TGGTGGCGGC AGATGAAATG ACGGTGCGCC AGGAGCTCGG CCGCCAGAAC ATTCTGGTCA AGCGCATCCA GCGCGTGCGC AGCCCCTTCG GCATCGGCCG CATACGCCCC CAGGACATCA CCCTGTTCGC ACGGCAGATG GCGACGATGA TCCGTGCCGG CATCCCGCTG CTGCAAGCCT TCAGCGTGGT GTCGGAGAGT CTCAAGCGCC CCGCCATGCA CCACCTCATC GAGACCTTGA TGAACGAAGT CTCGGCGGGG GCCAGCTTCT CCGAGGCGCT GGCCCAGCAT CCGCAGCATT TCGATCGCAT GTTCGTCAAC ATGGTCGAGG CCGGCGAGCA GTCGGGATCG CTGGATCGCA TGCTGGAGCG GGTGGCGAGC TACAAGGAAA AGATCGACTC CCTGCGCGCG CGCGTGCGCA AGGCCCTCTA TTACCCCGCC GCCGTGGTCC TGGTGGGCAT GGGGGTCACC GCCTTGCTGC TGGTCAAGGT CGTACCTCAG TTCGAGAGCC TGTTTCGCGG CTTCGGCGCC GACTTGCCCG CCTTCACGCA GTTGACCATT GCGCTGTCGC AGTGGGTCCA GGCGTACTGG CCGCACCTGC TCGGCGCCTT CATCGCTGCC TTGCTGCTGG TCCGTCTCGG CATCCGTCGC TCGCCGGGCT TCGCCTACCG TGCCGATGCG CTCATGCTGC GCCTGCCGGT CATCGGCGAC ATTCTGGACA AATCGTCGGT GGCGCGCTTT TCGCGCACCC TGGCGACGAC CTTCAGCGCC GGGGTGCCAC TGGTCGAATC GCTCAACACC GCAGCCGGCT CCACCGGCAA TCGGGTCTAC CAACGCGCCA TCGGCGAGGT CCGCGAGCAT GTCGCCAGCG GCCAGCAGCT CAACTTCGCC ATGCGTGCCA CCGGGCGCTT CCCCAACCTG GCGGTGCAGA TGATTGGCGT GGGCGAAGAA TCCGGTGCGC TGGACGCCAT GCTCAACAAG GTGGCGGATT TCTACGAGGA AGACGTCGAT ACCAAGGTCG ACGCGCTGAC ATCGCTGCTC GAACCCTTCA TCATCGTGGT GCTGGGCGTA CTGGTCGGCG GCCTCGTCGT CTCGATGTAT CTGCCGATCT TCGAAATGGG CTCGGCCATT TGA
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Protein sequence | MAVATRSKAP RRVVLHRWRW KGKNSRGETI QGELVAADEM TVRQELGRQN ILVKRIQRVR SPFGIGRIRP QDITLFARQM ATMIRAGIPL LQAFSVVSES LKRPAMHHLI ETLMNEVSAG ASFSEALAQH PQHFDRMFVN MVEAGEQSGS LDRMLERVAS YKEKIDSLRA RVRKALYYPA AVVLVGMGVT ALLLVKVVPQ FESLFRGFGA DLPAFTQLTI ALSQWVQAYW PHLLGAFIAA LLLVRLGIRR SPGFAYRADA LMLRLPVIGD ILDKSSVARF SRTLATTFSA GVPLVESLNT AAGSTGNRVY QRAIGEVREH VASGQQLNFA MRATGRFPNL AVQMIGVGEE SGALDAMLNK VADFYEEDVD TKVDALTSLL EPFIIVVLGV LVGGLVVSMY LPIFEMGSAI
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