| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2174 |
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| Symbol | |
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| ID | 4026668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 2447058 |
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| End bp | 2448797 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637967379 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_574224 |
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| Protein GI | 92114296 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTGT CTTCATCATC CACCTCCGAT ACGGAGGCAT CACCGCTGAA AGGGCTCGCC
GCGCGCCTGG TGCAGGAAGG TCTGCTCGAG GAACAGCAGG CGCGCAGCGC CCTGGAGGCC
GTACGCGAAA GCCACCAGTC GATGCTCGAG TATGTCATCG AGCGCCAGTG GGTCCCTGCC
CGCGCGGCGA CCCAGGTTGC GGCCTGGGAG TACGGTCTGC CGTTCGTCGA TCTCGAGGCC
GTCGACCTCG GCCGGCTCCC CACCGGTGAG GGCCTGCCCG ATGCGATGAT ACGTCGTCTG
GGCATACTGC CCCTGGCGCG CAGCGAGCGG CATATCAGCG TGGCGGTTCC CTACCCCGCG
ACCCTGGCGA AACTGGACGA ACTGCAGTTC AGTACCGGCC TTTCCGCCGA GGGGGTCCTG
GTCGCCGCCG ATCAGTTGCA ACCCGCCATC GACAGCCACC TTGCCCAGCG CGAGACGCAC
GGCATGCTCG AGGCCCTTGG CGATGCCAGC GAAGCGCTCG AGACGCTGGA TCTCGACGAT
GTCGAGCCTC TCGAGGATGG GCTCGGTACC GAGGACGACG ATGCGCCGGT GGTGCGCTTC
GTGCACAAGA TGATGATCGA TGCGGCCCGT CGCGGCGCCT CGGACATTCA CTTCGAGCCG
TACGAGTCGA CCTTTCGCAT TCGTTTTCGC ATCGATGGCA TCCTGGTCGA GGTCGCACGC
CCACCATTCA ACCTGCGTGC GCGTCTGTCG GCACGCCTCA AGGTCATGTC GCGCCTGGAC
ATCTCCGAAC GCCGCCTGCC TCAGGACGGC GCGATCAAGC TGCGGCTGTC GGCATCGCGA
ACCATCGATT TCCGCGTCAG CACCTTGCCC ACGGTCCATG GCGAGAAGAT CGTGCTGCGT
CTGCTGGATG CCGGCGCCAC GCGCCTGGGG ATCGATGCAC TGGGGTTCAG CGAGGCGCAG
CGCGCGATGT TCGAGCACGC CCTGGCACAG CCCCAGGGCA TGATTCTCGC CACCGGCCCC
ACCGGCAGCG GCAAGACCGT GACCTTGTAC ACTGGGCTCA ATATCCTCAA CACCGACGCG
CGCAACATTT CCACCGCCGA GGATCCCGTC GAACTCAAGC TCGACGGCAT CAACCAGGTC
AGCGTTCAGC CGAAGATCGG GCTGGATTTC GCCAATGCCT TGCGCGCCTT CCTGCGCCAG
GACCCCGACG TGGTCATGGT CGGCGAGGTG CGCGACCTGG AGACCGCCGA AATCGCCGTC
AAGGCCGCGC AAACCGGACA CCTGGTGCTC TCGACGCTGC ATACGAATTC GGCGGCGGAA
ACGCTGACGC GCCTGCGCAA CATGGGGGTG GCGGCCTACA ACATCGCCAG TTCGGTGAGC
CTGATCGTCG CCCAGCGGCT CGTGCGACAA CTCTGCCCGC ACTGCAAGAC GCCCGTCGAG
CTGCCCCGGG AGCTCTTCAT CGAGGCCGGC TTCACGTCCA CCGACATCGA ATCGACGACC
TGCTATCGTG CCGCGGGCTG CGCCCAGTGT ACCCACGGGT ACAAGGGACG CGTGGGAATC
TACGAGGTAC TGCCCGTCAG CGAGGCCATG AGCAAGTTGA TCATGGCCGA CGGCAATTCT
CTGGAACTGG GGGAACTGGC CCGTCAAGAA GGCCACCCCG ATTTAAGACG CAGCGGACTG
AGCAAGGTGC TCGCCGGCAT CACCAGCCTC GAGGAAATCA ACCGCGTGGT GCTGGAATGA
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| Protein sequence | MPLSSSSTSD TEASPLKGLA ARLVQEGLLE EQQARSALEA VRESHQSMLE YVIERQWVPA
RAATQVAAWE YGLPFVDLEA VDLGRLPTGE GLPDAMIRRL GILPLARSER HISVAVPYPA
TLAKLDELQF STGLSAEGVL VAADQLQPAI DSHLAQRETH GMLEALGDAS EALETLDLDD
VEPLEDGLGT EDDDAPVVRF VHKMMIDAAR RGASDIHFEP YESTFRIRFR IDGILVEVAR
PPFNLRARLS ARLKVMSRLD ISERRLPQDG AIKLRLSASR TIDFRVSTLP TVHGEKIVLR
LLDAGATRLG IDALGFSEAQ RAMFEHALAQ PQGMILATGP TGSGKTVTLY TGLNILNTDA
RNISTAEDPV ELKLDGINQV SVQPKIGLDF ANALRAFLRQ DPDVVMVGEV RDLETAEIAV
KAAQTGHLVL STLHTNSAAE TLTRLRNMGV AAYNIASSVS LIVAQRLVRQ LCPHCKTPVE
LPRELFIEAG FTSTDIESTT CYRAAGCAQC THGYKGRVGI YEVLPVSEAM SKLIMADGNS
LELGELARQE GHPDLRRSGL SKVLAGITSL EEINRVVLE
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