Gene Csal_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2171 
Symbol 
ID4026665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2444106 
End bp2445587 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content64% 
IMG OID637967376 
Productcation transporter 
Protein accessionYP_574221 
Protein GI92114293 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTGA TTCATCCGCG TATCATGCGC AGTCTGGCGG TCAGTGCGCC GGTGGTCAGG 
ATCCTGGCGG TTCTGCTGCT GGTGCTGGCC GTGCTCATGG TGGTGCCGTT GATCGTGCTG
ACCCTGGAAG GCGATCCCGA TCGCATGGCG TTCCTGCTGT CGATCGCCGT CGTCGCCGGG
GCCGCTTTGA CCATGTTGCT GATCACGCGG GGCGTGGAGA TCCTGCTGCG GCCCCGTCAG
ATGTTCATTC TGACCACCCT GAGCTGGGTG CTGGTGAGTG CCTGTGCCAG TTTGCCGCTG
ATACTGGGGG CGCCGCAGCT TTCCTTCACC GATGCCGTCT TCGAGTCCAT CTCGGCGATC
ACCACCACCG GTTCGACGGT GCTGGTGGGC ATCGATGACC TCTCCGATGG CTTGAAGCTA
TGGCGTGGCC TCATGCAGTG GCTGGGTGGC ATCGGCATCA TCGTGATGGC GATCGCCATC
CTGCCGTTTC TCAAGGTAGG CGGCATGCGC CTGTTCCAGA CCGAGTCGTC GGACTGGTCG
GACAAGGTGC TGCCGCGTGC CGGGGGCATT GCCAAGGCCA GCGGTGCGAT CTACCTGGGG
GGCACGCTGC TGGCGATGCT GACATACTGG CTGGCGGGCA TGACGCCACT GGATGCCGTG
GTGCACGCCA TGAGTTCCAT GGCCACCGGC GGGTTCGCCA ACTCCGATGC CTCGTTCGGG
GTGTATCAGG ATCGTCCGCT GATCCTGTGG CTGGCGTCGT TCTTCATGCT ATGCGGCGCC
TTGCCGTTCG TGCTGTTCAT CCGTGCGTTA CGCGATACGC CTCAGGTGCT GTGGCAGGAC
CAGCAGGTCC GTGGCCTGCT GAGTCTGCTG CTCGTGGTGA TACTTGGGTT GACGCTGTAT
CGCGTCGTCG GGGGTGTGGC GTTTTTCGAG GCGCTGACCC AGGTCGCGTT CAACGTGATC
TCGGTGGTCA CCACCACGGG CTACGCCTCC GACGACTATA CCCAGTGGGG ACCGCTGATC
GTCGCCGCGT TCTTTTACCT GACCTTCGTC GGTGGCTGCA GTGGTTCGAC CAGCGGCGGC
ATGAAGATCT TTCGCTTTCA GATCGGCGCC ATCATGCTGT TCACGCAACT GCGCCACCTG
GTGCATGCCC AGGGCGTGTT CGCGCAGCGC TATAACGGCA ATCCGTTGAG TGACGAGGTC
GTGCGCGGCG TCATTGCATT TTCGTTCTTC TTCTTTTTGA CCATCGCGGG ACTGGCGCTG
GGGTTGGCGC TGCTGGGGCT GGATCTGGTT ACGGCGCTGT CGGGGGCGGC CACTGCCGTG
GCCAACGTCG GCCCCGGGCT GGGGCCGATC ATCGGGCCGG CGGGGAACTT CGCGCCGTTG
CCCGATGCGG CCAAGTGGCT GCTCAGCCTG GGCATGCTGA TGGGACGTCT GGAGATCCTG
ACCGTGCTGG TGCTGTTGAC GCCCACCTTC TGGCGGAAGT GA
 
Protein sequence
MAVIHPRIMR SLAVSAPVVR ILAVLLLVLA VLMVVPLIVL TLEGDPDRMA FLLSIAVVAG 
AALTMLLITR GVEILLRPRQ MFILTTLSWV LVSACASLPL ILGAPQLSFT DAVFESISAI
TTTGSTVLVG IDDLSDGLKL WRGLMQWLGG IGIIVMAIAI LPFLKVGGMR LFQTESSDWS
DKVLPRAGGI AKASGAIYLG GTLLAMLTYW LAGMTPLDAV VHAMSSMATG GFANSDASFG
VYQDRPLILW LASFFMLCGA LPFVLFIRAL RDTPQVLWQD QQVRGLLSLL LVVILGLTLY
RVVGGVAFFE ALTQVAFNVI SVVTTTGYAS DDYTQWGPLI VAAFFYLTFV GGCSGSTSGG
MKIFRFQIGA IMLFTQLRHL VHAQGVFAQR YNGNPLSDEV VRGVIAFSFF FFLTIAGLAL
GLALLGLDLV TALSGAATAV ANVGPGLGPI IGPAGNFAPL PDAAKWLLSL GMLMGRLEIL
TVLVLLTPTF WRK