Gene Csal_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2160 
Symbol 
ID4026654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2428116 
End bp2429759 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content62% 
IMG OID637967365 
Productchaperonin GroEL 
Protein accessionYP_574210 
Protein GI92114282 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.343509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTA AACAAATCAA ATTCTCCGAT GATGCCCGCA AGCGCATGGC GCGTGGTGTT 
AACGTTCTGG CTGATGCGGT CAAGGTAACT CTCGGTCCGA AGGGACGTAA CGTCGTACTG
GAAAAGTCCT TCGGCTCTCC CACCGTGACC AAGGACGGTG TATCCGTCGC CAAGGAAATC
GAACTCAAGG ACAAGTTCGA GAACATGGGC GCACAGATGG TCAAGGAAGT CGCTTCCAAG
ACCTCTGACG TGGCCGGCGA CGGCACCACC ACGGCAACCG TCCTCGCGCA GTCCATCGTC
ACCGAGGGCA TGAAGGGCGT CACCGCCGGC ATGAACCCGA TGGACCTCAA GCGTGGCATC
GACCAGGCCG TCGACGCCGC CGTCAAGGAA ATCCAGTCGC TTTCCGTGCC CTGCACCGAT
GCCAAGGCCA TCGCCCAGGT CGGCACCATT TCCGCCAATG GCGACAAGCG TATCGGCGAA
ATCATTGCCG ATGCCATGCA GAAGGTCGGC AAGGAAGGCG TCATCACCGT CGATGAAGGT
CGCGGCTTCG AAGACGAGCT GGAAGTCGTC GAAGGCATGC AGTTCGATCG CGGTTACCTG
TCGCCCTACT TCGTGACCAA CCAGGACACC ATGATGGTGG AACTGGAAGA TCCGTACCTG
CTGATGGTCG ACAAGAAGAT CTCCAACATC CGCGAACTGC TGCCGGTGCT GGAAGCCGTC
GCCAAGTCCG GCAAGCCGTT GGGCATCATC GCCGAGGACA TCGAAGGCGA AGCGCTGGCC
ACCCTGGTGG TCAACACCAT GCGCGGCATC GTCAAGGCCG CGGCGACCAA GGCGCCCGGC
TTCGGTGATC GTCGCAAGGC CATGCTGCAG GACATCGCCA TCCTCACCGG TGGTACCGTG
ATTTCCGAGG AAGTCGGCTT GACCCTCGAG CAGGCCAACC TGGACCACCT GGGTAGCGCC
AAGCGCGTCA CCATGTCCAA GGAAAACACC ACCATCATCG ACGGTGCCGG TGTCGAAGCC
GATATCGAAG CGCGCGTCAG CCAGATTCGC GCCCAGATCG AAGACACCAG CTCCGATTAC
GATCGCGAGA AGCTGCAGGA GCGTGTCGCC AAGCTGGCCG GCGGTGTCGC GGTCATCCGC
GTGGGCGCAG CCACCGAGTT CGAGATGAAA GAGAAGAAGG CTCGCGTCGA AGACGCGCTG
CACTCGACTC GTGCTGCCGT CGAGGAAGGC GTGGTGCCGG GGGGCGGTAC CGCTCTGGTC
CGCATCCTGA ACAAGCTCGT CGACCTCAAG GGCGACAACG AAGACCAGAC CCACGGGATT
GCCATCGCCC TGCGCGCCAT GGAAGCCCCG CTGCGTCAGA TCGTGACCAA CGCGGGTCAG
GAAGCGTCCG TCATCGTCAA CCAGGTCAAG GCCGGCGAAG GTAACTACGG TTACAACGCA
CAAACCGGCG AGTATGGCGA CCTGTTCGAC ATGGGCGTTC TCGACCCGGC CAAGGTCACG
CGCAGCGCGC TGCAGTCCGC TGGTTCCGTG GCGGGTCTGA TGATCACCAC CGAAGCCATG
ATCGCCGACG ACCCGGACGA GAAAGAAGCC GGTGGCGGCG CACCGGACAT GGGCGGCATG
GGAGGCATGG GCGGCATGAT GTAA
 
Protein sequence
MAAKQIKFSD DARKRMARGV NVLADAVKVT LGPKGRNVVL EKSFGSPTVT KDGVSVAKEI 
ELKDKFENMG AQMVKEVASK TSDVAGDGTT TATVLAQSIV TEGMKGVTAG MNPMDLKRGI
DQAVDAAVKE IQSLSVPCTD AKAIAQVGTI SANGDKRIGE IIADAMQKVG KEGVITVDEG
RGFEDELEVV EGMQFDRGYL SPYFVTNQDT MMVELEDPYL LMVDKKISNI RELLPVLEAV
AKSGKPLGII AEDIEGEALA TLVVNTMRGI VKAAATKAPG FGDRRKAMLQ DIAILTGGTV
ISEEVGLTLE QANLDHLGSA KRVTMSKENT TIIDGAGVEA DIEARVSQIR AQIEDTSSDY
DREKLQERVA KLAGGVAVIR VGAATEFEMK EKKARVEDAL HSTRAAVEEG VVPGGGTALV
RILNKLVDLK GDNEDQTHGI AIALRAMEAP LRQIVTNAGQ EASVIVNQVK AGEGNYGYNA
QTGEYGDLFD MGVLDPAKVT RSALQSAGSV AGLMITTEAM IADDPDEKEA GGGAPDMGGM
GGMGGMM