Gene Csal_2086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2086 
Symbol 
ID4026548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2354130 
End bp2356229 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content68% 
IMG OID637967285 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_574136 
Protein GI92114208 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGCC TGCGCCGCTG GTTGCGCGCC TCGATCCGTC GCCGCCTGCT ATGGCTGGCC 
TTCGCGCCGC TGGTCCTGCT GGCATTGGCG CTCGCCGGGC TCACCGCCTA CTGGACCTCC
ACGTACAACG ACCGCCAGCT GTACATGAAA GTTCGTGCCG ACCTGGCCGT CGCCTCACGC
GTGCTAGACA GCTTGAGTCA GCAACAGCAG GCACGCCTGG AAGAACTCGC GCGCAGTCAT
GCCCTGGCCT CGTCGCTGCA AGGGGATGGC ACGCAATCGC TCGATGCCCT GCTCGATGAA
ACCCAGCGTG CGATGCAACT GGACTGGCTC CGCGTGGTTT CCCCCGACAT GCTCGATGGC
GACCCGCAGT TGCAACGCCG CCTGCAACCG CCCGATGACG GCAGCGGCAT TTCCGGTCTG
GACGTGCTCA GTGCCTCACG GCTCGAGACA CTGGCACCGG GTCTGGCCGA GCGCGCACGC
CTGCCGCTGC GCGAGACTCC GCAGGCAGTC CCGAGCGAAC GACGGCATGA AACGCGCGGC
ATGGTGCTGC GCACGCTGAC GCCCTTGCGT GACGCCCAGG GCCATCTGCG CCTGCTGCTG
GACGGCGGCC GCCTGCTCAA TGGCGACGCC GGGCCGGTCG ACGAGATTCG CGACCTGGTC
TACGGACCCG GCACGCTGCC CGAGGGCACC ACGGGCAGCG TGACCCTGTT TCTCGACGAT
GTGCGCATCG CTACCAACGT GCGCCTGGCC AACGGCGAGC GCGCCCTGGG CACTCGCGTC
TCGCAGCCCG TCAGCGAGCA GGTGCTGGCG CGCGGCGAAC GCTTCATCGA CAACGCCTTC
GTGGTCAGCG GGTGGTACGT GGCGGCCTAT GCGCCCCTTG CCTCGCTGAC CGGTCAACGC
ATCGGCATGA TCTACGCCGG CTTCCCCCTG ACGCCGTACC AGCGTCTGTA CCGCGAAACG
CTGCTCCAGA TCGGCGGCGT CCTGGCCGTG ATCATGCTGA TCTCCGGCTT GATGGTGATT
CGCGGCGTGG ATACCCTCGC CAGCCCCGTG CGCCGGATGC ACCGCGTGAT TCACGGCATC
CGTGAAGGCC GTCAGTTGCG TATCGGGCAT CTCGACAGCC AGGACGAACT GGCCGAGCTG
GCGCAGGAAT TCGATGCCAT GCTCGACCGG CTGGACGAAC ACCAGCATGC CCTGGAACGC
GCCGCCCAGA CGCTCGAGCG TCGCGTTCAG AGCCGCACGC ACTCGCTGAC CGAAAAAACC
CGCGCGCTCG AGGAGCACGT GGCCTTGCTC AAGCAGGCAC GGGCCAGCCT CATGACCCAG
GAAAAGCTCG CGGCCCTGGG CGAATTGACC GCCGGCATCG CGCACGAGAT CAACAATCCC
GCGGCGGTGA TACTCGGGCA CGTGGAACTC ATTGCCGATA CGCTGGGGCC CGACGTGGCC
CCGGTACGCG ACGAGGTGGA CACCATCATC GCGCAGGTCG AACGCATCCG CGCGCTGATC
GACAATCTGC TGCAATACTC GCGCGCCGGC GGCGGTCAGG AACCGGCGTT CCGCGCCGAG
GACATCAATG CCATCGCCGC GGACACCGAA GTCCTCGTCC GCCACGCGCT CGACAAGCAT
GGTCACCGGC TGGTGAGCGC CCTGCATGCC ACGCGGCCGG TCGAATGTCA TCGTGGTCAG
CTGCAGCAAG TGTTGATCAA CCTGCTGCTC AACGCCGCCC AGGCCAGCAC CGCGCCGGTG
ACCATTCACC TCGTCACGCG CGACAGCGTG CGCGAGGTGC CGGGACGCGG CGACCTCGAC
GGCGTGGAAA TCCGCGTCGC CGATCCGGGA CCGGGCATGT CCAAGGCAGT CCGCCAGCGC
ATCTTCGACC CGTTCTTCAC CACCCGCGAG GCCGGCTCCG GCCTGGGCCT GGCGATCAGT
GCCGGCATCG TGCGTCGCAG CGGGGGAGAC ATAGGTGTCG CCTCGAGGCC GGGCCGCGGC
ACGATCTTCC ATGTCTGGCT GCCATGCCGG GCAGCACCCA GCGGCGCAGA GGAGGCCACG
ACCCGCAAGT TGCTCGACTC TCTCAGCGAT GCCACCGCGC CGTCGTCACG CGGCAGTTAA
 
Protein sequence
MNGLRRWLRA SIRRRLLWLA FAPLVLLALA LAGLTAYWTS TYNDRQLYMK VRADLAVASR 
VLDSLSQQQQ ARLEELARSH ALASSLQGDG TQSLDALLDE TQRAMQLDWL RVVSPDMLDG
DPQLQRRLQP PDDGSGISGL DVLSASRLET LAPGLAERAR LPLRETPQAV PSERRHETRG
MVLRTLTPLR DAQGHLRLLL DGGRLLNGDA GPVDEIRDLV YGPGTLPEGT TGSVTLFLDD
VRIATNVRLA NGERALGTRV SQPVSEQVLA RGERFIDNAF VVSGWYVAAY APLASLTGQR
IGMIYAGFPL TPYQRLYRET LLQIGGVLAV IMLISGLMVI RGVDTLASPV RRMHRVIHGI
REGRQLRIGH LDSQDELAEL AQEFDAMLDR LDEHQHALER AAQTLERRVQ SRTHSLTEKT
RALEEHVALL KQARASLMTQ EKLAALGELT AGIAHEINNP AAVILGHVEL IADTLGPDVA
PVRDEVDTII AQVERIRALI DNLLQYSRAG GGQEPAFRAE DINAIAADTE VLVRHALDKH
GHRLVSALHA TRPVECHRGQ LQQVLINLLL NAAQASTAPV TIHLVTRDSV REVPGRGDLD
GVEIRVADPG PGMSKAVRQR IFDPFFTTRE AGSGLGLAIS AGIVRRSGGD IGVASRPGRG
TIFHVWLPCR AAPSGAEEAT TRKLLDSLSD ATAPSSRGS