Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2061 |
Symbol | |
ID | 4026523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 2328594 |
End bp | 2330408 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637967260 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_574111 |
Protein GI | 92114183 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.36158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCGCCA CCCGCACGCT GCTGGGTGAC ATTGCCTCGC AATTGCGCGC CCAGGGACGG GCGCTGCTGG TCTTCCACCT GTTCTTCACC GTCCTGGCCA CGGCAGTTCT GGTACCGCTG ACGACCTGGA CCCTGGCCGG CCTGCTGCAT GCCTTCCAAC AGCCGGCGCT CAGCAACGCT CAGATCGCCG AGATGGCGCT GTCGCCGCTG GGCCTGGCGT GGGGCCTGGT GGCGCTGGGC CTGAGTTTCC TGCTGATATT CCTGCAGCAG GCCGGCATGA TGCGCTTGCT CGCCCTCTCC GGCTCGGGAC GCTATCACGC ATCGATGAAT GCGTTGTGGC AAACCGGCAA GCGCTTGCCG GGCATTGCCG GGCTCACCTT TCTGCAGGTC GGCGCGCATC TGCTACTGCT CGTCCCCTTC GCGCTGCTCA TCGCCACGGC CTATGACCTT CTTCTGGGCG AAGCCGAGTT GTACGTGGTC ATGCGCCTGA AGCCGCCGGC CTTCTGGTAC TTCGCATCGA TCGGGGGCAG CCTGGGCGCC ATCGCGCTGT GGTTGCAGGC CTGGCTCTAT GCGCGCTGGT TCCTGGCGCT TCCGGCGCTG GTGCTGGACC GGCTCACTCC CGTTCAATCC CTGGCGCGCA GCCGCGAACT GACCCGGGGC CGTCATGCCC GCATCACGGC CCTGGCACTG GCCTTCGCGT TCGGTGTGGC GGCCTTTCCC ATCGCCTTCA GCCTGCTCTT CAATGCCCTC GCGATGCCGT TGATCGAGCA CCTGCCGGAT CGTATGTCGC TTCTGATTCC CGTCATGCTG ATCTATGTGG CGGTATACAG CGTGCTGATC ATCGCCATGA CCTTCCTGGG GGTCGCAGCC AACAGCCTGC TGGTGATCAA CCTCTACCAC CGCCTCGGCG GCAGCACACT GGCGCTCGAT GACCTTCCCG CACCGGCACG TTCGGGCTGG TGGGCCTGGA CGGCGGAAGC CGTGCTGCTG ATCTTCGCGC TGGTGCAAGC CGGCTGGGTC CTGAGTGACT TTCAACTGCG CGACGACGTG CGCGTCACCG CCCATCGCGG CAGCTCGATC GCCGCCCCCG AGAACACCCT GGCCGCCATG CGCCGGGCCA TTCAGGAAGG CGCCGACTAC CTGGAGATCG ATGTCAGACA ACTGCGCGAC GGCAACGTCG TGCTCTCCCA CGACCGCAAC CTGAAGCGCC TGACCGGCCG GGACCTGGAC ATCACCGACC TCACGCTGGC GGAAACCCGC GACATCGACA TCGGAAGCTG GTTCGACGAC GCCTTTGCCG ACGAGCGCCT GGCGACCCTC GACCAGGTGA TCGGGCTGGC GCACGGCAAG GCACGCCTTT ACGTCGAGCT CAAGCCCGCC CCCGGCAACG AAACCGATCT CATCGAGGCC GTCGTCGAAC GCTTGCGGCA TCATGGCATC GCCGACAGCG CGGTGGTCGC CTCGCTTTCT CCGACGATCA TCCGCGATGT CGAGGCATAC GCTCCCGACA TCGACACCAC GCTGTTCGTT CAATTCCTGT TGCCCGGCGC GCTGGCCGCG ACGCCTGCCG ACAACATCGG ACTGCGGCAT ACCCAGGCCA ATACCGATGT CGTGCGTCTG GTTCAGAACA GCGGCCGTGA GCTGCATGTA TGGACCGTCA ACGACCCGCG CGAGATGTCA CGCTACATCG ACATGGGCGT CGACAACATC ATCACCGACC GCCCCGCGAC ATTGATCGAC CTGCTCACCG AACGCGCCAC GCTGAGCGAC GGCGAGCTGC TGCTGGTCAA GCTGCGCAAC TGGCTGCACC ACTGA
|
Protein sequence | MLATRTLLGD IASQLRAQGR ALLVFHLFFT VLATAVLVPL TTWTLAGLLH AFQQPALSNA QIAEMALSPL GLAWGLVALG LSFLLIFLQQ AGMMRLLALS GSGRYHASMN ALWQTGKRLP GIAGLTFLQV GAHLLLLVPF ALLIATAYDL LLGEAELYVV MRLKPPAFWY FASIGGSLGA IALWLQAWLY ARWFLALPAL VLDRLTPVQS LARSRELTRG RHARITALAL AFAFGVAAFP IAFSLLFNAL AMPLIEHLPD RMSLLIPVML IYVAVYSVLI IAMTFLGVAA NSLLVINLYH RLGGSTLALD DLPAPARSGW WAWTAEAVLL IFALVQAGWV LSDFQLRDDV RVTAHRGSSI AAPENTLAAM RRAIQEGADY LEIDVRQLRD GNVVLSHDRN LKRLTGRDLD ITDLTLAETR DIDIGSWFDD AFADERLATL DQVIGLAHGK ARLYVELKPA PGNETDLIEA VVERLRHHGI ADSAVVASLS PTIIRDVEAY APDIDTTLFV QFLLPGALAA TPADNIGLRH TQANTDVVRL VQNSGRELHV WTVNDPREMS RYIDMGVDNI ITDRPATLID LLTERATLSD GELLLVKLRN WLHH
|
| |