Gene Csal_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2024 
Symbol 
ID4025920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2287521 
End bp2289668 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content63% 
IMG OID637967219 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_574074 
Protein GI92114146 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAA CCGAATTCTA CGAGACCTTT TTCGAAGAGG CCGAAGAGCT TTTGGGCGAC 
ATGGAACGCC ATCTGCTCGA ACTGGATGTC GATGAGCCGG ACCCGGAACA GCTCAACGCC
ATTTTCCGTG CCGCGCATTC GATCAAGGGG GGTGCGGGGA CGTTCGGGTT CAGCGTGCTC
CAGGAAACCA CGCACATGCT CGAAAACTTG CTGGATAACG CCAGGCAAGG CGAGCTCAAG
TTGCGCACGG ATATCGTCGA CCTCTTTCTG GAAACCAAGG ACATGCTTCA CGACCAGCTT
GATGCCTATC GCAATGGCGC CGAACCGGAC CCGGAGGCCT ACGCTCGTAT CTGCCAGACG
CTGAAACAGC TGGCGCTGGA AGAACTCGGG CATAGCGTGG GCAGCGACAG CGAAGCGGAT
GCCGCTCCCG CCGCCGGTGA CGCTGGCGAC GAGACGTCGT CAGCGCAGCA GGACGCCGCC
GCCACTCCCG ACACCGAGCA GCCTGTGGAT GAGGCGGCGG AAGACAGTGG CTGGCTGAAA
GTGGCGCTGT TGAACGTATC CGACAAGGAT CGTGAGCTGC TCGTCGAAGA GCTGGGCAAC
CTGGGCACCA TCAACGAACA GCATGGCGAT GCCTCGCGTT ACGAAGTGGT ACTGGAAAGT
GCCACCAGCC GTGACGATAT CGAAGCCGTC ATGTGCTTCA TCGTCGAGCC GGAGCAGTTG
AGCATCACCG CGATACCCGC CCCCGGCAGT GCCGAAACGT CCGCGGCGCC CGCCGCCGAC
ATGCCGGAGC CCCCGGCGGA AGACACCGCG TCTCAGCCCC GGGAAGACAA GCCGGCCGAA
AAACAGCCGG CCGAGAGTGC GCCGGCGACA CCCGGCAAGG TCGAGCCGGC GAACAAGAAG
CCGGCCAAGA AAAAGGCCGG CGCCGAGTCG GCGACGATCC GTGTGCCCGT CGAGAAAGTC
GATCAGATCA TCAACCTCGT CGGCGAGCTG ATCATCACCC AGTCGATGCT CGAGCAGACC
GCCAGCGAGC TGGACGCGGT CGCGCATGGG CCCTTGGTCA ACGGCATGAA CCTGCTGCAG
CGCAATGCCC GCGACCTGCA GGAGTCGGTG ATGTCGATCC GCATGGTTCC CATGGACTAT
GTGTTCAGCC GCTTTCCTCG TCTCGTGCGG GATCTCACCG GCAAGCTGGG CAAGGATATC
GAGCTGGTCA CCGAAGGGCA GTCCACCGAG CTCGACAAGA GCCTGACCGA GCGCATCATC
GACCCGCTGA CTCACCTGGT GCGCAACAGT CTCGATCACG GTATCGAAAT GCCCGATGCC
CGCGAAGCGG TAGGCAAGCC GCGCACCGGC AAGCTGACCC TGTCCGCGCA GCACCAGGGC
GGCAACATCC TCATCGAGGT GAAGGATGAT GGGGGCGGCC TCAACCGCGA CAAGATCCTG
GCCAAGGCGG CGCATAACGG TCTGGCCGTG TCCGACAGCA TGAGCGACGA CGAGGTCTGG
CAGCTCATCT TCGCGCCGGG CTTCTCGACC GCCGACCAGG TGAGCGACGT CTCCGGCCGC
GGGGTGGGCA TGGATGTCGT CAAGCGCAAT ATTCAGGCCA TGGGCGGCCA CGTCGAGATC
CAGTCCTGGC CCGGCGAGGG CACCACGACC CGCGTGGTGC TGCCGCTGAC CCTGGCCATT
CTCGACGGCA TGTCGATCAA GAGCGGGCAG GAAGTCTTCA TTCTGCCGCT GTCGGCGGTA
CTCGAATCCC TGCAGCCGAG TCATGACGAC ATCTATTCGA TGGCCGGCGA CGACAAGCTG
CTCAAGGTGC GTGACGAATA TCTGCCCCTG ATCGCCTTGC ACGACATCCT GCACATCCAG
GGAGCCGAGC GGGACCCGAC CCGCTGCATC GCGGTCATTC TGCAAGCCGA GGGGCGCCGT
TATGCCTTGC TCGTCGACGA CCTGGTCGGC CAGCAGCAGG TGGTGGTCAA GAATCTCGAA
ACCAATTATC GCAAGGTGCC GGGGATTTCC GCGGCGACGA TCCTCGGGGA CGGCAGCGTG
GCGTTGATCC TCGACGTCGC CGATGTCAAC CGCTTGCATC GTCAGCGCTC CAGCGCTCCC
AAGCACGCTG AAAACACCGT ATCACGCCAG GAGGACGTAG TTTCATGA
 
Protein sequence
MDITEFYETF FEEAEELLGD MERHLLELDV DEPDPEQLNA IFRAAHSIKG GAGTFGFSVL 
QETTHMLENL LDNARQGELK LRTDIVDLFL ETKDMLHDQL DAYRNGAEPD PEAYARICQT
LKQLALEELG HSVGSDSEAD AAPAAGDAGD ETSSAQQDAA ATPDTEQPVD EAAEDSGWLK
VALLNVSDKD RELLVEELGN LGTINEQHGD ASRYEVVLES ATSRDDIEAV MCFIVEPEQL
SITAIPAPGS AETSAAPAAD MPEPPAEDTA SQPREDKPAE KQPAESAPAT PGKVEPANKK
PAKKKAGAES ATIRVPVEKV DQIINLVGEL IITQSMLEQT ASELDAVAHG PLVNGMNLLQ
RNARDLQESV MSIRMVPMDY VFSRFPRLVR DLTGKLGKDI ELVTEGQSTE LDKSLTERII
DPLTHLVRNS LDHGIEMPDA REAVGKPRTG KLTLSAQHQG GNILIEVKDD GGGLNRDKIL
AKAAHNGLAV SDSMSDDEVW QLIFAPGFST ADQVSDVSGR GVGMDVVKRN IQAMGGHVEI
QSWPGEGTTT RVVLPLTLAI LDGMSIKSGQ EVFILPLSAV LESLQPSHDD IYSMAGDDKL
LKVRDEYLPL IALHDILHIQ GAERDPTRCI AVILQAEGRR YALLVDDLVG QQQVVVKNLE
TNYRKVPGIS AATILGDGSV ALILDVADVN RLHRQRSSAP KHAENTVSRQ EDVVS