Gene Csal_1972 details

Gene Information

• Locus tag: Csal_1972
• ID: 4027212
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: -
• Start bp: 2228435
• End bp: 2229109
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637967168
• Product: flagellar L-ring protein
• Protein accession: YP_574023
• Protein GI: 92114095
• COG category: [N] Cell motility
• COG ID: [COG2063] Flagellar basal body L-ring protein

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGTGA AAAGCGGGGT ACGCGCGCTA TGCCTGCTCC TGATGTTGAT CATGAGCGGG 
TGCGCGCAGT TGCCGCATGA GTCGGTGGTC CCCGATACCG GGCCGGTGAG CTATCCCGAG 
GCACCGCTGC CGCAGCCCAA CGGGGCGATC TATCAGGCGC GCTACGGGTA TCAGCCGCTC 
TTTCAGGACC GGCGTCCGCG CCAGATCGGC GACATCATCA CGATCACGAT CAACGAGGAT 
GTCAGCGCCA GCAAGGATTC CTCGGCCAGC GCCAATCGCG AGGGCAGCAT GGGGCTGGAT 
CTGGAGACGA TCCCCGACCT GATGAGCTTC CTCGAGGATA ACGGTCTGGA TGTCTCGGGC 
GAGAACGACT TCGAGGGCAG CGGTGGCGCG AGCGCCAGCA ACACCTTCAC GGGGACGCTG 
ACGGCAACCG TGGTCGACAT CCTGCCCAAT GGCAATCTCA GCATCCGCGG GGAAAAACGC 
ATCGCCATCA ACCAGGGCAC CGAGTACATC CGCTTCTCGG GCGTGGTCGA TCCGCGTTCG 
GTGACGACGC AGAACACCGT GCCTTCCGGG CAGGTGGCCG ATGCGCGCAT CGAATACGTG 
GGTGATGGCT ATATCAACGA GGCGCAGCAC ATGGGTTGGC TCCAGCGTCT CTGGCTGAAC 
ATTGCGCCTT TCTGA 

 

Protein sequence

MDVKSGVRAL CLLLMLIMSG CAQLPHESVV PDTGPVSYPE APLPQPNGAI YQARYGYQPL 
FQDRRPRQIG DIITITINED VSASKDSSAS ANREGSMGLD LETIPDLMSF LEDNGLDVSG 
ENDFEGSGGA SASNTFTGTL TATVVDILPN GNLSIRGEKR IAINQGTEYI RFSGVVDPRS 
VTTQNTVPSG QVADARIEYV GDGYINEAQH MGWLQRLWLN IAPF