| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1967 |
|---|
| Symbol | |
|---|
| ID | 4027207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 2222219 |
|---|
| End bp | 2223004 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637967163 |
|---|
| Product | flagellar biosynthetic protein FliR |
|---|
| Protein accession | YP_574018 |
|---|
| Protein GI | 92114090 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTACAGG TGACGTTCGC GCAGCTGCAT GAATGGCTCA CGCTGTTCTT CTGGCCGTTC
GTTCGCATCC TGGCGTTCCT GGCGGCATCG CCGATCTGGA ATCAGCACGG CGTGCCGCGC
CAGGCGTCCG TGCTGCTGGG CGCCCTGATG GCCTTCGCCA TCGGCCCCGC CCTGCCTCCC
ATGCCCGATA CGCCCATCGT CTCGATCGGC GGCCTGGGCA TACTCATCCA GGAAATGCTG
ATCGGCATTG CGCTGGGCAT GGTCTTGCGC GTCACCATCG CCGTGGTGCA AGCCGCCGGC
GAGTTCATCG GACTGCAGAT GGGGCTTGCC TTCGCCACCT TCTTCACGCC GGGCGTCGGC
AACAGCATGG TGCTGTCACG CATCTTCCAG ATGATCACGC TATTGATGTT CCTGGCCCTC
AACGGGCACT TGATCGCCCT GGAGATACTC GCCAATTCCT TCCAGACGCT CCCCGTCGGC
GGGCCGAGAG TCGACGGAAG CGCGGGCGAG GTCATTGCTC GCTGGGGCGG CGAGATATTC
ACCTCCGGCG TGTTGATGGC CCTGCCTCTG ATCGTCTCGT TGTTGATCAT CAACCTGACG
CTCGGCGTGC TCAACCGCGC CTCGCCGCAG CTGTCGATCT TCTCGATCGG CTTCCCCATG
ACCCTGACCA CCGGCGTGGT GCTGCTGATG ACGCTCATGC CGGACCTGCT GCGCTTCCTC
GAGATCCTGT TCAGCAACAG CTTCAGTACC ATGCAGGAGG TGGTCCAGCG CCTGGGCAGT
GGCTAG
|
|---|
| Protein sequence | MVQVTFAQLH EWLTLFFWPF VRILAFLAAS PIWNQHGVPR QASVLLGALM AFAIGPALPP
MPDTPIVSIG GLGILIQEML IGIALGMVLR VTIAVVQAAG EFIGLQMGLA FATFFTPGVG
NSMVLSRIFQ MITLLMFLAL NGHLIALEIL ANSFQTLPVG GPRVDGSAGE VIARWGGEIF
TSGVLMALPL IVSLLIINLT LGVLNRASPQ LSIFSIGFPM TLTTGVVLLM TLMPDLLRFL
EILFSNSFST MQEVVQRLGS G
|
|---|
| |