Gene Csal_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1963 
Symbol 
ID4027203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2220124 
End bp2220651 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content63% 
IMG OID637967159 
Productflagellar motor switch FliN 
Protein accessionYP_574014 
Protein GI92114086 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACC CCCAAAACCC AGACAAGAAA GGCACCGAGG ACGAGTGGGC CGAGGCCATG 
GCGCAGCAGC AGGCCGAGGA AGGCAACGAT GAGACCTCCG ACGACGCGGA AGAGGACCTT
TGGGCCGCCG CGATGGCGGA GCAGCAGGCC ACCGAGGACG AAGCCAACGC CGAGGCGAGC
GATCCCGCGC CGGACAAGTC CCAGGCGCAA AACGCCGATC ACGAGGTGTT CAAGCCGCTC
GACGAGGGCG CCTCGTCTAC CACGCCCCGC GATCTCGACC TGATCATGGA CATCCCGGTC
AAGCTCAGCG TGGAGCTGGG CCGGACCAAG ATCACCATCA AGCAGCTTCT CGAGCTCGCC
CAGGGGTCCG TGATCGAGCT GGATGGCCTC GCCGGCGAGC CCATGGACAT CCTCATCAAT
GGCTACCTGA TCGCGCAAGG GGAAGTCGTG GTCGTGGATG ACAAGTACGG CATCCGCATC
ACGGAAATCA TCACCCCGTC GGAACGCGTC AAAAAGCTGA ACAAATGA
 
Protein sequence
MTDPQNPDKK GTEDEWAEAM AQQQAEEGND ETSDDAEEDL WAAAMAEQQA TEDEANAEAS 
DPAPDKSQAQ NADHEVFKPL DEGASSTTPR DLDLIMDIPV KLSVELGRTK ITIKQLLELA
QGSVIELDGL AGEPMDILIN GYLIAQGEVV VVDDKYGIRI TEIITPSERV KKLNK