Gene Csal_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1958 
Symbol 
ID4027198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2215143 
End bp2216549 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content70% 
IMG OID637967154 
ProductATPase FliI/YscN 
Protein accessionYP_574009 
Protein GI92114081 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.191624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAGA CGCCGCTTGC CGACATGCCC GACGAGACCT CTCACACTGC TCAATGGCAG 
CGCGCCCTGG GCAAGGTCTC GGAGCGCATC GAGGGGCTCG AATCGCGACG CCCCCACGGC
AAGATCGTGC GTGCCACCGG CCTGGTGCTC GAGGCCACCG GTCTGCGTCT GCCTCTGGGC
AGCGCCTGTC TGGTCGAGCT GGCCCAGCAC GGGCATGTCG GCTATGCCGA AGCCGAAGTC
GTGGGCTTCG CCGGCGACCG CCTGTTCCTG ATGCCGCTGG GCGACACCCA CGGCCTGGTT
CCCGGGGCGC GCGTGCTGAC GCTGGGCAAT AACCGCCAGG ATGCCGCCAG CGCGCGCCGT
TTCCCGCTGG GCGACGCACT CCTGGGGCGC GTGCTGGATG GCAACGGCCG CCCGCTGGAC
GGCAAGGGCG CACTCGATCA CGCGTCCCAC GCCCCGCTCT CCACCGCCCC CATCAACCCG
CTGGATCGCG CGCCGATCGA CAACGTCATC GATGTCGGCA TTCGCGCCAT CAACGGCCTG
CTGAGCGTCG GGCGCGGCCA GCGCATGGGC CTGTTCGCCG GCTCGGGGGT GGGCAAGAGC
GTGTTGCTGG GTATGATGTC GCGCTACACC CAGGCCGACG TGATCGTGGT CGGCCTGATC
GGCGAGCGTG GCCGCGAGGT CAAGGACTTC ATCGAAAACA TCCTCGGCCC CGAGGGCCGC
GAGCGCGCCG TGGTCGTCGC CGCCCCGGCC GACGTATCCC CCTTGCAGCG CTTGCAGGGG
GCCTCCTACG CCACGCGCAT CGCCGAAGGG TTCCGCGACG AGGGCCGCAA CGTCCTGCTG
ATCATGGACT CGCTGACCCG CTATGCCATG GCCATGCGCG AAATCGCCCT CGCCGTGGGC
GAGCCCCCGG CCACCAAGGG CTATCCGCCG TCGGTCTTCG CGCGCCTGCC CGGTCTCGTC
GAGCGCGCGG GCAACGGCCG GCCCGGCGGC GGTTCGATCA CGGCGTTCTA TACCGTGCTG
ACCGAGGGCG ACGACCAGCA GGACCCGATC GCCGACGCCG CACGGGCGAT TCTCGACGGG
CACGTCGTCC TGTCGCGCCA GCTGGCCGAA AGCGGGCACT ACCCCGCCAT CGACATCGAG
GCGTCGATCA GCCGCGCCAT GACGGCCATC GTCGAGGGCG ATCACCAGCG CCGCGCACAA
CGTTTCAAGC AGTTGTTCTC GCGTTATCAA CGCAACCGCG ACTTGATCAG CGTCGGCGCC
TATGCCGCCG GCCACGACCC GCAGCTCGAC CGCGCCGTCG CGCTGTACCC GCGTCTCGAG
GCCTTTCTTC AGCAAGGGAT CGACGAACGC GCCGATGTCG ACTCGACGCT CGACGCCCTG
GCCTCGCTGT TTCCGGAGAC GCGCTGA
 
Protein sequence
MTETPLADMP DETSHTAQWQ RALGKVSERI EGLESRRPHG KIVRATGLVL EATGLRLPLG 
SACLVELAQH GHVGYAEAEV VGFAGDRLFL MPLGDTHGLV PGARVLTLGN NRQDAASARR
FPLGDALLGR VLDGNGRPLD GKGALDHASH APLSTAPINP LDRAPIDNVI DVGIRAINGL
LSVGRGQRMG LFAGSGVGKS VLLGMMSRYT QADVIVVGLI GERGREVKDF IENILGPEGR
ERAVVVAAPA DVSPLQRLQG ASYATRIAEG FRDEGRNVLL IMDSLTRYAM AMREIALAVG
EPPATKGYPP SVFARLPGLV ERAGNGRPGG GSITAFYTVL TEGDDQQDPI ADAARAILDG
HVVLSRQLAE SGHYPAIDIE ASISRAMTAI VEGDHQRRAQ RFKQLFSRYQ RNRDLISVGA
YAAGHDPQLD RAVALYPRLE AFLQQGIDER ADVDSTLDAL ASLFPETR