Gene Csal_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1927 
Symbol 
ID4028369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp2184674 
End bp2185342 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content59% 
IMG OID637967121 
Producthypothetical protein 
Protein accessionYP_573978 
Protein GI92114050 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.199344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATACC GTACGTCGCA AATCGCCGGT CACGAGACGC GATCGGTAAG CACCAACAAG 
GTGCTGCGCA ACACTTACAT GCTCTTGGCC ATGACATTGC TGTTTTCCGC CGTGACGGCG 
GGAACGGCCA TGGCCATGGG AATCGGGCAG ATGAATATCT TCGTCTTCCT GATCGGCGCC 
TATGGCTTGA TGTTCCTGGT GCACAAGACA GCCAACTCGG CGGCGGGGCT TCTGTCGATC 
TTCGCCTTCA CCGGTTTCAT GGGCTTCACG CTGGGGCCGA TGTTGAGCCT CTATCTGTCG 
CTGCCCAATG GTCCCCAGCT GGTCATGACC GCTCTGGGGA TGACCGGGGC CACCTTCATC 
GGCTTGTCCG CGGTGGCACT GATCACGCGC AAGGATTTCA GCTTCCTGGC CAACTTCATG 
ATCGCCGGTG CGATCGTGCT GGTACTGGCC ATGGTCGTGG CGATGATCTT CAACATCACC 
GCGCTGGCCC TGGCGGTGTC CGCTGGCTTC GTGCTGTTTT CCTCGGCCGC GATCCTGTAT 
CAGACCAGTG AAATCATCCA CCGCGCGGGC GAGACCAACT ATATCCTCGC CACCATTACC 
CTGTTCGTCT CGATCTACAA CCTGTTCGTC AGCCTGTTGT CCATCCTGGG CTTCGTGTCG 
AACGACTGA
 
Protein sequence
MAYRTSQIAG HETRSVSTNK VLRNTYMLLA MTLLFSAVTA GTAMAMGIGQ MNIFVFLIGA 
YGLMFLVHKT ANSAAGLLSI FAFTGFMGFT LGPMLSLYLS LPNGPQLVMT ALGMTGATFI 
GLSAVALITR KDFSFLANFM IAGAIVLVLA MVVAMIFNIT ALALAVSAGF VLFSSAAILY 
QTSEIIHRAG ETNYILATIT LFVSIYNLFV SLLSILGFVS ND