Gene Csal_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1900 
Symbol 
ID4026813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp2158512 
End bp2159159 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content63% 
IMG OID637967094 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_573951 
Protein GI92114023 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0225533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACG ACATCGCCGA CCTGCGACGC GATTACGCCG GCGAAACGCT CTCCGTCGAG 
AGTGCGCCGG CTTCGCCCCT CGACCTGTTC CAGACGTGGT TTGCCGCCGC ACGTGAGCAC 
GAGACGCAGG ACGCCAACGC CATGACGCTG GCCACCGTGG ACAGTCAGGG ACTCCCCCAC 
GCGCGCGTGG TCCTGCTCAA GCAGCTCGAC GACAAGGGGC TGGTATTCTT CACCAACTAC 
CAGAGCCACA AAGGCAGCGA GCTGACCAAC GTTCCCTATG CCGCTCTGGT CTTCTGGTGG 
CCCACGCTGC AGCGCCAGAT ACGCATCGAG GGCCGCGTGG AAAAGGCCAG TGCCGAGGTC 
TCCGATGCCT ACTTCGCCAA CCGGCCCCGT GACAGCCAGC TAGGTGCCTG GATTTCCCAG 
CAAAGCGTGG AAATTCCCGA CCGCGACTGG CTGGAGGAGC GCAAGCAGCG CTTCGAGCAG 
GTCTACGGCG AACAAACGGT GGAGCGTCCG CCTCACTGGG GAGGTTATCG GGTCCTGCCG 
TTTTTGCTGG AATTCTGGCA GGGGCAACCC AATCGGCTAC ATGATCGCAT CCGCTATCGT 
TACCATGAGC AGGATGCCGC CTGGAGCAAG ACCCGCCTGG CGCCCTGA
 
Protein sequence
MNYDIADLRR DYAGETLSVE SAPASPLDLF QTWFAAAREH ETQDANAMTL ATVDSQGLPH 
ARVVLLKQLD DKGLVFFTNY QSHKGSELTN VPYAALVFWW PTLQRQIRIE GRVEKASAEV 
SDAYFANRPR DSQLGAWISQ QSVEIPDRDW LEERKQRFEQ VYGEQTVERP PHWGGYRVLP 
FLLEFWQGQP NRLHDRIRYR YHEQDAAWSK TRLAP