| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1828 |
|---|
| Symbol | |
|---|
| ID | 4029107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 2083406 |
|---|
| End bp | 2085040 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637967022 |
|---|
| Product | peptide chain release factor 3 |
|---|
| Protein accession | YP_573879 |
|---|
| Protein GI | 92113951 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG4108] Peptide chain release factor RF-3 |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTTC TGCGTCGAGC TGCCGCCAAT CAGCGAAGTA TATTGATGCC AGACACTCAG
ATCGCTCAAG AAGCGGGGCT ACGCAGAACC TTTGCGATCA TTTCGCACCC CGACGCCGGC
AAGACCACCA TCACGGAAAA AATGCTGCTG TTCGGCAATG CGATCCAGCT AGCCGGGTCG
GTCAAGAGCA AGCGTGACGA ACGTCACGCC ACCTCCGACT GGATGAAGAT GGAGCAGGAG
CGTGGCATCT CGGTGACGAC CTCGGTCATG CAGTTTCCCT ACCAGGGCCG GATCGTCAAT
CTGCTCGACA CGCCCGGGCA CGAAGACTTT TCCGAGGACA CCTACCGCAC GCTGACGGCC
GTGGATTCGG CACTGATGGT CATCGACGGC GCCAAGGGGG TCGAAGATCG TACCATCAAG
CTCATGGATG TGTGTCGTTT GCGTACGACG CCGATCCTGA CCTTCATCAA CAAGATGGAC
CGAGACATCC GGGATCCGAT CGAAGTGATG GATGAGGTCG AGACGGTACT GAACATTCAG
TGTGCGCCCA TGACGTGGCC GATTGGCATG GGGCGGCATT TTCGCGGCGT CTACCATCTC
TACAACGATG TCATTCACCT CTACAAGCAG GGGCAGGGCA ATCGCATTCC CGAGGATGTG
CGCATCGAAG GTCTCGACAA CCCCGAGGTC GACGAGACGC TGGGAGCGGA TGCCGCTGAC
GAGCTGCGCA TGGAAGTCGA GCTGGTGCGT GGTGCCTCGC ATACCTTCGA CCTCGAGGCC
TATCGTCGCG GTGAACTGAC GCCAGTGTAT TTCGGCACCG CCATGGGCAA CTTCGGGGTG
CGCGAGATGC TCGATGGCTT CGTCGAATAC GCGCCGGCGC CGTTGCCGCG CGACACCGAC
AAGCGCAGCG TAAAGGCCGA TGACGAGCGC TTTACCGGTT TCGTCTTCAA GATCCAGGCC
AACATGGATC CCAAGCACCG TGACCGTGTT GCCTTCTTGC GCGTCTGTTC CGGGAAGTAC
GACAAGAACA TGAAGATGCG CCACGTGCGG ATCGGCAAAG ACGTCAAGAT TGCCGACGCG
CTAACGTTCA TGGCGTCCGA TCGCTCGCAT GTCGAGGAAG CCTGGCCCGG CGATATCATC
GGCCTGCACA ACCATGGCAC GATCCAGATC GGTGACACCT TCACGCTCAA CGAGGACATG
CGCTTCACGG GAATTCCGCA CTTCGCGCCC GAGTTGTTCA AGCGCGTGCG TCTGCGCGAT
CCGCTGAAGA TGAAGGCCTT GCAGAAAGGG CTGACCCAGC TCTCCGAGGA GGGGGCAACG
CAGGTCTTCA TGCCGCTGGA TAACAATGAC CTGATCGTCG GCGCCGTGGG GTCGTTGCAG
TTCGATGTGG TCGCTCATCG CCTGAAGCAG GAATATAAAG TCGACTGCCT GTATGAGCCC
GTGAACGTGC AGACGGCGCG CTGGGTGTAT TGCAACGACG CCAAGATGCT CGACGAATTC
AAGCGCAAGG CCAGCACCAA CCTGGCCCTG GACGGCGGGG GATACCTGAC GTATCTGGCC
CCGACGCGCG TCAACCTGCA GATGACGCAA GAGCGTTGGC CGGATGTCGA GTTCCGTGCC
ACCCGGGAGC ATTGA
|
|---|
| Protein sequence | MHFLRRAAAN QRSILMPDTQ IAQEAGLRRT FAIISHPDAG KTTITEKMLL FGNAIQLAGS
VKSKRDERHA TSDWMKMEQE RGISVTTSVM QFPYQGRIVN LLDTPGHEDF SEDTYRTLTA
VDSALMVIDG AKGVEDRTIK LMDVCRLRTT PILTFINKMD RDIRDPIEVM DEVETVLNIQ
CAPMTWPIGM GRHFRGVYHL YNDVIHLYKQ GQGNRIPEDV RIEGLDNPEV DETLGADAAD
ELRMEVELVR GASHTFDLEA YRRGELTPVY FGTAMGNFGV REMLDGFVEY APAPLPRDTD
KRSVKADDER FTGFVFKIQA NMDPKHRDRV AFLRVCSGKY DKNMKMRHVR IGKDVKIADA
LTFMASDRSH VEEAWPGDII GLHNHGTIQI GDTFTLNEDM RFTGIPHFAP ELFKRVRLRD
PLKMKALQKG LTQLSEEGAT QVFMPLDNND LIVGAVGSLQ FDVVAHRLKQ EYKVDCLYEP
VNVQTARWVY CNDAKMLDEF KRKASTNLAL DGGGYLTYLA PTRVNLQMTQ ERWPDVEFRA
TREH
|
|---|
| |