Gene Csal_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1790 
Symbol 
ID4028589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2037884 
End bp2038639 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID637966978 
ProductTetR family transcriptional regulator 
Protein accessionYP_573841 
Protein GI92113913 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTTCTC GTCGGGCATT CGACACGGCG TGCGGCAGGC GACGGGCACG GGTGCGTTGC 
ACCGGCTGCG CTCGCTGGGG CAGACTTTCT TACCCGGCAA CGAAGAGAGC GGCCATGACG
ACGATGAAAG TGCCCGGATC GGGAACGCGG GCGCGCAATG AAAGCGTGAT TCTCGAGGCG
GCGGAGCGGA TTTTCGCGCG CCATGGCTAT CGTGGGGCGA GCGTGCAGGC CATCGCCGAG
GCGGCCGGTT TGCCCAAGTC CAATGTGCTG TATTATGTCG GCAGCAAGCG CGAGCTCTAT
GTCTCGCTGC TCGAGCGTAT GATGGCGCGC TGGAATGCCA TGCTCGACGA TATCGACGAA
GACGACGATC CCGGCGAGGT ACTGGAGAGC TTCATTCGCA GCAAGATGCG TCTCACGCAG
CAGCATCCCC AGGGGTCTCG CCTGTTCGCG GCGGAAGTGC TCCAGGGCGC GCCTTTCCTG
CAGTCCTACC TGCATGGCGA GTTGCGCGAA TGGGTGCGTT CCCGGGCGCG CATCTTCGAG
CGCTGGGCGG AAAAGGGGCT GATGGATCCC GTCGATCCGG TGTGGCTGAT CTTCCTGATC
TGGTCGGCGA CCCAGCATTA CGCGGATTTC GAGGCGCAGA TACTGGGCAT CACCGATCAG
GCACAGCTCG ACGACGGCTA CTATCGTGCG ATTACCGACT TCCTGTGCCA GGTCATCCTC
AAGGGATGCG GCGTTCGCGC GCCGTCTGCC ACCTAG
 
Protein sequence
MSSRRAFDTA CGRRRARVRC TGCARWGRLS YPATKRAAMT TMKVPGSGTR ARNESVILEA 
AERIFARHGY RGASVQAIAE AAGLPKSNVL YYVGSKRELY VSLLERMMAR WNAMLDDIDE
DDDPGEVLES FIRSKMRLTQ QHPQGSRLFA AEVLQGAPFL QSYLHGELRE WVRSRARIFE
RWAEKGLMDP VDPVWLIFLI WSATQHYADF EAQILGITDQ AQLDDGYYRA ITDFLCQVIL
KGCGVRAPSA T