Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1684 |
Symbol | |
ID | 4028696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 1912082 |
End bp | 1913848 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637966872 |
Product | TrkA-like protein |
Protein accession | YP_573735 |
Protein GI | 92113807 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGTTG CGGCACTAAT AACGTTAGTC TTAATCGTTG CCGTGTTGGC GACATTGGCG CTTACCCGAG TCGCCCCTGA TGTCGTCCTG ATGGCGGCGC TCGCCTTCCT GGTGATCAGC GGTATTCTCA CGCCCAGCGA AGCGCTGGCG GGGTTCGCCA ACCCCGGCGT GATGACCATC GCCACGCTCT ACGTGGTCGC GGCGGGGCTG AAGGAAACCG GCGCCATCCA GTGGCTGGCG CATCGCCTGC TCGGCCAGCC CCGGCGTTTG CGCCAGGCGC AGTTGCGCGT GCTGCTTCCG GCCTCGGGGC TGAGCGCCTT CATGAACAAC ACCACCGTGG TGGCCATGTT CATCCCCGCC ATTCAGGAAT GGGCGGCCCG CCTGCGGTTG CCGACCTCCA AATTGCTGCT GCCGCTCAGC TACGCCTCGA TACTCGGGGG CACCTGCACG CTGATCGGCA CCAGCACCAA TCTCGTGGTG GATGGCCTGC TGCAGAGCGA GCGGGGCATC TCGCTGCACA TGTTCGAGCT GGCTTGGGTA GGCGTGCCGC TGGTGGTCAT CGCCGGGGGC TTTCTCTATC TGATGGCGGA CCGCCTACTG CCCAACCGCC AGGGGGCGCT GGAACAACTC GAACAGGCAC GGGAATACGC CGTGGAAGTT CGCGTGATTC CACAAGGCCC CCTGGAAGGC AAGAGCATCG CCGATGCGGG CTTGCGAAGC CTGGCGCATG GTTACCTGGC GGACATCGAG CGTGACGGCG AGTTGATGAC CGCCGTGCCG CCGGAAACCA AGCTGCAGGC CGATGACATC CTCGTCTTCG TCGGTGCTCC CGAATGCGCC CGGGAGTTGC GCCGTGTCCA CGGCCTGCGC CCGGCCAATG GCGACGTGCG CAAGCTGGAT ATCGCCCACC ACCGGCGCTG CCTGGTCGAG GCCGTGATCG GCCCGGATTT CACCGGGATC GAGCAGACGG TGCGCGAATC GCGCTTTCGC TCGCGCTATC AGGCGGTGAT CCTTTCCATC TCCCGCCATG GCCGCCGCTT GCCCGGCAAG CTGGGGGATA TTCGCCTTCA GGTGGGCGAT ACGTTATTGA TGGAGACCGC CCAGGAATTC GTCTCGCAAT ATCAGTACCG CAAGGATTTT CTGCTCGTCA GCGCGCTCAA CGACTCCACG CCGCCGGATT TTCGCAAGGC GCCCTGGGCG TTGGGCATTC TCGGCGCCAT GGTGCTGGTG AGCGCCACGG GGCTGTTGAG CATCCTCGAG GCGGCGTTTC TGGCCGGCGG CGCCATGCTG CTCACGCGCT GCGTCACGGC GAGCAAGGCA CGGCGCTATC TGGAGCTTTC GGTGCTCATC GTCATCGCCG CCTCGTTCGC CCTGGGCAAC GCCATGGACA AGACCGGCGC CGCAAGCCAG ATCGCGCAAT GGCTATTGCT GGCGGATGGC CTCTCGCCCT GGATGGCCCT GGCCATGGTC TACGCCCTGA CCGTCGCCTT CACCGAGCTG ATCACCAATA ACGCCGCCGC CGTGTTGATG TTTCCGGTGG CCGCCGCCGT GGCCGAGCAA CTGGGCGTGA GTATCATGCC CTTTGCCATC GGCATCATGT TCGCTGCCTC GGCCAGTTTC ATGACCCCGC TGGGCTATCA GACCAATCTC ATGGTGCTTG GCCCCGGCGG GTATCGTTTC GTGGATTACC TGCGCCTCGG CGCGCCCATG AGCCTGTTGG TCGGGGGCAT CGTAATAGGG TTAGTGCCGT TTGTTTGGAA TTTTTAA
|
Protein sequence | MTVAALITLV LIVAVLATLA LTRVAPDVVL MAALAFLVIS GILTPSEALA GFANPGVMTI ATLYVVAAGL KETGAIQWLA HRLLGQPRRL RQAQLRVLLP ASGLSAFMNN TTVVAMFIPA IQEWAARLRL PTSKLLLPLS YASILGGTCT LIGTSTNLVV DGLLQSERGI SLHMFELAWV GVPLVVIAGG FLYLMADRLL PNRQGALEQL EQAREYAVEV RVIPQGPLEG KSIADAGLRS LAHGYLADIE RDGELMTAVP PETKLQADDI LVFVGAPECA RELRRVHGLR PANGDVRKLD IAHHRRCLVE AVIGPDFTGI EQTVRESRFR SRYQAVILSI SRHGRRLPGK LGDIRLQVGD TLLMETAQEF VSQYQYRKDF LLVSALNDST PPDFRKAPWA LGILGAMVLV SATGLLSILE AAFLAGGAML LTRCVTASKA RRYLELSVLI VIAASFALGN AMDKTGAASQ IAQWLLLADG LSPWMALAMV YALTVAFTEL ITNNAAAVLM FPVAAAVAEQ LGVSIMPFAI GIMFAASASF MTPLGYQTNL MVLGPGGYRF VDYLRLGAPM SLLVGGIVIG LVPFVWNF
|
| |