Gene Csal_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1642 
Symbol 
ID4025910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1869585 
End bp1870145 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content68% 
IMG OID637966831 
ProductXRE family transcriptional regulator 
Protein accessionYP_573694 
Protein GI92113766 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.065261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGATC CAACCGCTCA TATCGCCGCG ACGCTCAAGA CGCTGCGCGG CGCGCAAGGC 
TGGAGTCTCG ATCGTGCCGC GCGCGCGACC GGGGTCAGCA AGGCCATGCT GGGGCAGATC
GAGCGCGGCG AGTCCAGTCC CACGGTGGCC ACGCTGTGGA AAATCGCCGG CGGTTTCCGC
GTGTCGTTCT CGCTGTTCTT CGAACAGGCC TCGGTCCAGG GCATCGTCCC CAATGGCGAG
GCCGCGCCCA CGGTGCTGGA AGATGCCGCC GCCGGCATGA CGGTCACGCC GCTTTTCGCC
TTCGATCCAC GCCTGCGCTT CGAGATGTTC CTGATCGAAC TGGCGCCGGG GGCCTGCAGC
GAGTCGTCAC CGCACGAACC GGGCGTCGTC GAGCACGTGG TGATGCTCGA CGGCACTCTG
GAACTGGCGC TCGACGGTCG CTGGGAAGCC CTCCGGCCGG GTGAGGCGCG CCGCTTCGCC
GCCGACCGCG AGCATGGCTA TCGCAATGTC GGCGAGCGAG CGGCGCGCTT TCACGACGTG
ATTCATTACC CGCAGCTCTA G
 
Protein sequence
MQDPTAHIAA TLKTLRGAQG WSLDRAARAT GVSKAMLGQI ERGESSPTVA TLWKIAGGFR 
VSFSLFFEQA SVQGIVPNGE AAPTVLEDAA AGMTVTPLFA FDPRLRFEMF LIELAPGACS
ESSPHEPGVV EHVVMLDGTL ELALDGRWEA LRPGEARRFA ADREHGYRNV GERAARFHDV
IHYPQL