Gene Csal_1637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1637 
Symbol 
ID4025905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1860973 
End bp1862400 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content70% 
IMG OID637966826 
ProductRNA methyltransferase 
Protein accessionYP_573689 
Protein GI92113761 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATGC TGGGCAAACG GCGTCCACCG CGCACCGCCA ACGAACGCGT GCGTCGGGAG 
CGCGGGTCGG CAACACGGCG CGACGACGCG ACTGCCGACG GCCTGTCCAT CGAGCGTCTG
GCGCACGATG GACGCGGCGT GGCGCGCGAT CCGCACGGCA AGACGGTCTT CGTGGACCAG
GCCCTGCCCG GCGAACGGGT ACGGGTCGCC GTGCATCGTC AACGCAAGCG CTTCGACGAG
GCGCACGTCG TCGAGCGCCT GGCGACGTCC CCCGAGCGGG CGACACCGCC TTGTGCGTAT
TACGGGCGCT GCGGCGGCTG CGATCTGCAG CATCTCGATC TCGAGGCGCA GCGCGAGCAC
AAGCGCCGTA CGCTGGACGA GCTGTTCACC CGCCAGGGAC TGACCCTGCC CGAGATAGAG
GTGCTGGCCG GCGAAGGGCT GGCATACCGG CGCCGGGCGC GCCTGGGCGT CAAATGCGAT
GCCGAAGGTA CGCCGCACCT GGGGTTTCGC GCCCGGGGCA GCGAGCACTT GATCGATATC
GACAGCTGCG TGGTGCTCGA GCCCGTGCTG TCACGGCTGA TCGCGCCGCT GCGTGCATGC
CTGGTGCAAC TGGAAGCGCC CCGGCGCGTG GGTCACATCG AGCTGATCGC CACCGCCGAG
GGTGCTTGCG TGGTGGTGCG TCAGCTCCGC GAGGTGCCCG GCGACGAAGC CCGCTGGCGC
CGGTTCGCCG CCGAGCACGA TGTCACCCTG GCCTGGCGGG TGGGACGCGA GGCGCCGACG
CTACGCTGGC TGCACGCGCC GCGCGGCGAG GCCCTGCATG TCACCCTGGT ACTGGACGAC
ACCACACTGT CGCTCGGCTG CGTGCCGGGC GATTTCCTGC AGATCAACGC CGACGTCAAT
GCCCGCCTGG TGCGCACGGC CCTGGCCTGG CTCGCGCCAC GCGGGGAAGA GCGCGTCCTC
GATCTGTTCG CCGGCGTGGG CAACTTCACG CTCGCGCTGG CGCCCCGCGT CGCGTCGATC
ACCGGCATCG AGGGCAGCCC CGCGATGGTC GAGCGTCTCG CCGACAATGC ACGTCGCGCC
GGGCTGCACC AGGTCGGTGC ACAACAATCC GATCTGGCCA CCCAGGTACC GGAGGTCGCG
GCGGTCGACT GGGTGATCAT GGACCCGCCG CGCGGCGGGG CGGAGGCCCT GTGCCGCGCG
CTCGCCGACA GTCCGGTGAC GACGCTGCTC TACGTCTCCT GCGATCCCGC GGCGCTGGCA
CGCGATGCGG CACGCCTTGT GCAAGGCGGC TACCGTATCC AGCGCGCCGC GCTGGCCGAT
ATGTTTCCAC ACACCGCGCA TTTGGAATCG ATGCTGCTAC TGACCCGCGA CACGCCGCGC
GGTCGGTCCA CATCCGTAGA AAGGGAAGAT CATGGTCAAG GTCCGTGA
 
Protein sequence
MAMLGKRRPP RTANERVRRE RGSATRRDDA TADGLSIERL AHDGRGVARD PHGKTVFVDQ 
ALPGERVRVA VHRQRKRFDE AHVVERLATS PERATPPCAY YGRCGGCDLQ HLDLEAQREH
KRRTLDELFT RQGLTLPEIE VLAGEGLAYR RRARLGVKCD AEGTPHLGFR ARGSEHLIDI
DSCVVLEPVL SRLIAPLRAC LVQLEAPRRV GHIELIATAE GACVVVRQLR EVPGDEARWR
RFAAEHDVTL AWRVGREAPT LRWLHAPRGE ALHVTLVLDD TTLSLGCVPG DFLQINADVN
ARLVRTALAW LAPRGEERVL DLFAGVGNFT LALAPRVASI TGIEGSPAMV ERLADNARRA
GLHQVGAQQS DLATQVPEVA AVDWVIMDPP RGGAEALCRA LADSPVTTLL YVSCDPAALA
RDAARLVQGG YRIQRAALAD MFPHTAHLES MLLLTRDTPR GRSTSVERED HGQGP