| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1593 |
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| Symbol | |
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| ID | 4027555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1815843 |
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| End bp | 1816790 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637966782 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_573645 |
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| Protein GI | 92113717 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.102826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAG GCCGCGACGT ACAGTGGGTG GAAGTGAGTG AAGGGCAGGT CGGTCAGCGG
ATCGACAATT TCTTGCGCAC ACGGCTCAAG GGTGCGCCCA AGTCGTTGAT CTATCGGATC
GTGCGCAAGG GGGAGATTCG CGTCAACAAG AAGCGGGTCA AGGCCGACTA TCGCCTGGAG
CTGGGCGATC TGGTGCGTAT CCCGCCGCTG CGGCTGGCAC CCGAGGAGGC GGTCCGCGAA
GTCAGCGACG GATTGCGCAA CCTGCTGGCG GGCAGCGTGC TGGTCGAAGG GCCGGCCTGG
CTGGTGATCA ACAAGCCGGC CGGGCTCGCC GTGCATGGTG GCAGCGGGGT GAAGATCGGC
TTGATCGAGG CCCTGCGTCA GGTGCGCGAC GATCTGGACT TCCTCGAGCT GGTGCACCGC
CTGGATCGCG ACACGTCCGG GTGCCTGCTG CTGGCCAAGT CACGTACGGC GTTGGTGACC
TTGAACCAGG CGCTCAAGGC ACACCAGATG GACAAGCAGT ACCTGGCGCT GGTGCAGGGG
CGCTGGCCGA CGCGGCGCGA GTTCGTCAGC GCGCGGCTCG ATCGTTTCGA TGCGGGCAAT
GGCGAGCGGC GAGTGCGGGT CGACAGTCAG GGCAAGGTGT CGCGCACGCG CTTCGCCGTG
CGCGAGGCCT TTTCGCGTGT CACCTTGATC GAGGCCGAGC CGGTCACCGG GCGCACGCAC
CAGATCCGCG TCCATGCCGC ACATGCCGGG CACGCCCTGT TGGGTGACGA CAAGTACGGC
ACCCGCGAGG GCGCGCGTCT GGCGCGCGAG CTCAAGCTGG AGCGCCTGTT CCTGCACTCC
AACGCCTTGA CGTTCCCCGA GCCCAGCAGC GGCCGTCCGG TGCACGTCAA GGCGCCGCTC
GGGGAGACCC TCGAGGCGGT GCTGGCGAGG GCGCGGCAAG CGCGCTGA
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| Protein sequence | MAEGRDVQWV EVSEGQVGQR IDNFLRTRLK GAPKSLIYRI VRKGEIRVNK KRVKADYRLE
LGDLVRIPPL RLAPEEAVRE VSDGLRNLLA GSVLVEGPAW LVINKPAGLA VHGGSGVKIG
LIEALRQVRD DLDFLELVHR LDRDTSGCLL LAKSRTALVT LNQALKAHQM DKQYLALVQG
RWPTRREFVS ARLDRFDAGN GERRVRVDSQ GKVSRTRFAV REAFSRVTLI EAEPVTGRTH
QIRVHAAHAG HALLGDDKYG TREGARLARE LKLERLFLHS NALTFPEPSS GRPVHVKAPL
GETLEAVLAR ARQAR
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