| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1560 |
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| Symbol | |
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| ID | 4028125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1775773 |
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| End bp | 1778406 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637966749 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_573612 |
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| Protein GI | 92113684 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAGT CACTGGTCAT CGTGGAGTCG CCGGCCAAGG CCAAGACGAT CAACAAGTAT
CTCGGCAACG ATTTCGTCGT GAAATCGAGC GTGGGACACA TCCGTGACTT GCCGACGAGC
GGATCCGGCA AGAACGCAAC CGATCCCAAG GAGCGGGCAC GCCAGGCGGC GGCGACACGC
AAGATGTCGC CCGACGAGAA GGCCGTCTAC AAGAAGCAGA AACACTGGAA CCAGCTCGTG
CGCCGCATGG GGATCGACCC CGAGCACGGC TGGGAAGCCA ACTACGAAGT GCTGCCGGGC
AAGGAGAAGG TCGTCGCCGA GCTCAAGAAG CTCGCCGAGA AGGCCGATGC CGTCTATCTC
GCGACCGACC TTGACCGCGA GGGGGAGGCG ATCGCCTGGC ACTTGCAGGA GACCATCGGC
GGCGATGCCT CGCGCTATCG GCGGGTGGTC TTCAACGAGA TCACCAAGAA CGCCATTCAG
GAGGCCTTCA AGACGCCGGG CGACCTCGAC CTGTCCCGGG TCGAGGCCCA GCAGGCGCGT
CGTTTCCTGG ACCGGGTGGT GGGCTTCATG CTCTCGCCGC TGTTGTGGAG CAAGATCGCT
CGTGGCCTGT CGGCGGGGCG CGTGCAGTCG GTGGCGGTGC GTCTGATCGT CGAGCGTGAG
CGCGAAATTC GCGCCTTCGT GCCGGAGGAG TTCTGGGACG TTCACGCCGA CCTCCTGCCC
GCCTCGGGCG AGGACACTCC CATCCGGTTC GAGGTGGCGC GTCACCAGGG CAAGGCGTTC
CGCCCGACGT CCGAGCAGGA AACGCTCGAG CGCATCGCGC CGCTGCGCGA CGCAGCGCTG
ACGATCACCG AGCGCGAGAC CAAGCCGACG CGCTCCAAGC CCAACGCTCC CTTCATTACC
TCGACGCTGC AGCAGGCCGC CAGCGGTCGG CTGGGCTTTT CGGTGAAGAA GACCATGACC
CTGGCGCAGC GTCTCTACGA GGCGGGGTAC ATCACCTACA TGCGTACCGA TTCCACCAAC
CTGTCCCAGG ATGCGGTGGA AAGTGCGCGT GCCTTCATCG GCGAGCGCTT CGGCCAGTCC
TATCTGCCCG ACGCTCCCAA TCGCTACGCC AGCAAGGATG GCGCTCAGGA AGCGCACGAG
GCGATCCGTC CCACCGAGGT GACGCAGGCC GGCGACGACC TGGCGGTGGA GCGCGACGCC
CAGCGCTTGT ACGAATTGAT CTGGCGCCAG TTCGTGGCCT GCCAGATGGT GCCGGCGGAG
TATCTGGCGA CGACCTTGAC CATCGAGGCC GAGGGCTTCG AGCTCAAGGC GCGCGGCCGC
GTGCTCAAGT TCGATGGCTA CACGCGGGTG ATGAAGCCTG CGGGCAAGAA AGAGGAAGAC
CAGTCGCTCC CCGACCTCGA GGAAGGGGCC GAGATGACCT TGCAGGCGCT CGATCCGCAG
CAGCACTTCA CCAAGCCGGC TCCCCGCTAT ACCGAGGCGA GCCTGGTCAA GGAACTGGAA
AAGCGCGGGA TCGGGCGTCC GTCGACCTAT GCGTCGATCA TTTCCACGAT CCAGGACCGT
GGCTACGTCA AGCTGGAAAA TCGCCGCTTC TACGCCGAAA AACTCGGCGA TATCGTTACC
GATCGCCTCG CCGAGTCGTT CAGCGATCTC ATGGATTATG GCTTCACGGC GCGCATGGAA
GACCATCTCG ACGAGATCGC CGCCGGCAAT CGTGAATGGC GCGAGTTGCT GGATGCCTTC
TACGCCGAGT TCAAGGCCAA GCTGGAGCAT GCCGAGGCCG AGGAGGGCAT GCGTCCCAAT
CAGCCGGTGC CCACGGATAT CGACTGTCCC ACCTGCGGTC GCAAGATGCA GATCCGCACG
GCCTCCACGG GCGTTTTCCT GGGCTGCTCG GGGTATAACC TGCCGCCCAA GGAGCGCTGC
AAGACGACCA TCGACCTCAT TGCCGGTGAC GAAGCGGTGG CGGCCGACGC CGACGAGGAA
GCGGAAACCG AAGCGCTGCG TGCCAAGCGG CGTTGCCCGG AGTGCGGTAC TGCCATGGAC
AGCTACCTGA TCGACGAGAC CCGCAAGCTG CATATCTGCG GCAACAGCCC GGATTGCAGC
GGGTACGAGA TCGAGCAGGG AAAATTCCGC ATCAAGGGCT ATGACGGGCC CACCATCGAA
TGCGACAAGT GCGGCAGCGA GATGCAGCTC AAGTCGGGAC GTTTCGGCAA GTACTTCGGC
TGCACCAACG AGAACTGCAA GAACACGCGC AAGTTGCTGC GCAATGGCGA GGTCGCGCCG
CCCAAGATGG ATCCGATCCC GATGCCCGAG CTGGCCTGCC AGAAGGTCGA GGACCATTAC
GTGTTGCGCG ATGGCGCCAG CGGCCTGTTC CTGGCTGCGA GCCAGTTTCC CAAGAACCGG
GAAACGCGTG CGCCACTGGT CAAGGAGCTC AAGGCGCATC GCGACGAGTT GCCCGAGAAA
TATCATTTTC TGCTCGACGC GCCGAGCGAG GACCCTGATG GCCGCGACGC CCAGATCCGC
TTCTCGCGCA AGACCAAGCG CCAGTACGTG ATGAGCGAGC GCGACGGCAA GGCGAGCGGG
TGGCGCGCCG AGTACGAGGA TGGCCAATGG CGAGTCGAGG ATAAGCGCAA ATGA
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| Protein sequence | MGKSLVIVES PAKAKTINKY LGNDFVVKSS VGHIRDLPTS GSGKNATDPK ERARQAAATR
KMSPDEKAVY KKQKHWNQLV RRMGIDPEHG WEANYEVLPG KEKVVAELKK LAEKADAVYL
ATDLDREGEA IAWHLQETIG GDASRYRRVV FNEITKNAIQ EAFKTPGDLD LSRVEAQQAR
RFLDRVVGFM LSPLLWSKIA RGLSAGRVQS VAVRLIVERE REIRAFVPEE FWDVHADLLP
ASGEDTPIRF EVARHQGKAF RPTSEQETLE RIAPLRDAAL TITERETKPT RSKPNAPFIT
STLQQAASGR LGFSVKKTMT LAQRLYEAGY ITYMRTDSTN LSQDAVESAR AFIGERFGQS
YLPDAPNRYA SKDGAQEAHE AIRPTEVTQA GDDLAVERDA QRLYELIWRQ FVACQMVPAE
YLATTLTIEA EGFELKARGR VLKFDGYTRV MKPAGKKEED QSLPDLEEGA EMTLQALDPQ
QHFTKPAPRY TEASLVKELE KRGIGRPSTY ASIISTIQDR GYVKLENRRF YAEKLGDIVT
DRLAESFSDL MDYGFTARME DHLDEIAAGN REWRELLDAF YAEFKAKLEH AEAEEGMRPN
QPVPTDIDCP TCGRKMQIRT ASTGVFLGCS GYNLPPKERC KTTIDLIAGD EAVAADADEE
AETEALRAKR RCPECGTAMD SYLIDETRKL HICGNSPDCS GYEIEQGKFR IKGYDGPTIE
CDKCGSEMQL KSGRFGKYFG CTNENCKNTR KLLRNGEVAP PKMDPIPMPE LACQKVEDHY
VLRDGASGLF LAASQFPKNR ETRAPLVKEL KAHRDELPEK YHFLLDAPSE DPDGRDAQIR
FSRKTKRQYV MSERDGKASG WRAEYEDGQW RVEDKRK
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