Gene Csal_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1544 
Symbol 
ID4027642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1756234 
End bp1756701 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content66% 
IMG OID637966733 
Producthypothetical protein 
Protein accessionYP_573596 
Protein GI92113668 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00441553 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCC GCGTTCTGGC CGTTGGAACG CGCATGCCCG ACTGGGTGAC ACGAGGCGTC 
GACGAGTATC TCAAGCGGCT GCCGCGGGAT TTCAGCGTCG AGATCGTCGA GATCGCGCCC
GGCAAACGCG GCAAGAATGC CGACGTGGCG CGGGCGATTC AGGGCGAGGG CAATGCCATG
CTGGCCAAGC TGCGCGATCA GGAGCGTGTC ATCGCGCTGG CCGTCGACGG ACAACACTGG
AGTACCGAGC GCCTCGCCGC CAATGCCGAT CATTGGCGGC AGGACGGGCG CGATGTGGCA
CTGCTGGTGG GCGGGCCGGA CGGGCTCGAC CCCCGCTTGC TGTCGCGCGT CGAACAGCGC
TGGTCGCTAT CGGCACTGAC GCTGCCGCAT CCGCTGGTGC GCATTCTATT GGCCGAGCAG
CTGTATCGTG CTTGGACCTT GCTGGCCGGG CACCCTTATC ACCGATGA
 
Protein sequence
MKLRVLAVGT RMPDWVTRGV DEYLKRLPRD FSVEIVEIAP GKRGKNADVA RAIQGEGNAM 
LAKLRDQERV IALAVDGQHW STERLAANAD HWRQDGRDVA LLVGGPDGLD PRLLSRVEQR
WSLSALTLPH PLVRILLAEQ LYRAWTLLAG HPYHR