| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1514 |
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| Symbol | |
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| ID | 4029210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 1721738 |
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| End bp | 1723420 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637966697 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_573566 |
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| Protein GI | 92113638 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0264792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGG CTCGTGAATA CGACTACATC ATCATCGGGG CCGGTTCCGC CGGCAACGTA
CTCGCCACTC GCCTGACCGA GGATCCGGAC GTCCAGGTGC TGCTGCTCGA GGCCGGCGGT
CCCGACTACC GCTTCGACTT CCGCACGCAG ATGCCGGCGG CGCTGGCCTA CCCCCTGCAG
GGCAAGCGCT ACAACTGGGC GTTCGAGACC GACCCCGAAC CCTACATGAA CAATCGCCGC
ATGGAGTGCG GACGCGGCAA GGGCCTGGGC GGGTCGTCGT TGATCAACGG CATGTGCTAC
TTGCGCGGCA ACGCGCTGGA TTACGACAAC TGGGCCAAGA TACCGGGCCT GGAGGACTGG
AACTACCTGC AGTGCCTGCC CTACTTCAAG CGCGCCGAGA CCCGCGACAT CGGCCCCAAC
GATTATCATG GCGGTGACGG CCCGGTGTCG GTGGCCACAC CCAAGGAAGG CAACAACGAG
CTCTACGGCG CCTTCATCCG CGCAGGCATC GAGGCCGGCT ATCCGGCCAC CGAGGACGTC
AACGGCTATC AGCAGGAAGG CTTCGGCCCC ATGGACCGCA CGACGACGCC CAACGGACGT
CGTGCCTCCA CGGCGCGCGG CTACCTGGAT ATCGCCAAGC AACGCCCCAA CCTGACCATC
GAGACGCACG CCACGACCGA TGTCATCGAA TTCGAGGGCA AGCGCGCCGT CGGCGTGAGC
TACGAGCGCA AGGGACAGGC CCAGCGTGTT CGCGCACGCC GCGAAGTGCT GCTGTGCGCG
GGCGCCATCG CCTCGCCGCA GATCCTGCAG CGTTCCGGCG TGGGCAATCC CGAGCATCTC
GAGGAATTCG ACATTCCCGT GGTGCACGAG CTGCCGGGCG TCGGCGAAAA CCTCCAGGAT
CACCTGGAAA TGTACATTCA GTACGAGTGC AAGAAGCCCA TTTCGCTGTA CCCGGCGCTC
AAGTGGTACA ACCAGCCCAA GATCGGTGCC GAGTGGCTGT TTTTCGGCAA GGGCATCGGC
GCCAGCAACC AGTTCGAGGC GGCCGGCTTC ATTCGTACCA ACGACCAGGA AGAGTGGCCC
AATCTGCAGT ACCACTTCTT GCCGATCGCC ATCAGCTACA ACGGCAAGAG CGCGGTGCAG
GCCCACGGCT TCCAGGCCCA CGTCGGCTCC ATGCGCTCCA TGAGCCGCGG TCGCATTCGC
CTGACATCGC GCGACCCCAA GGCCGCGCCG AGCATCCTGT TCAACTACAT GTCCCACGAC
AAGGATTGGC AGGAATTCCG CGACGCCATT CGCATCACGC GCGAGATCAT CGAGCAGCCG
ACGATGGACG AGTACCGCGG CCGCGAAATC TCGCCGGGGC CGAATGTGCA AAGCGACGCC
GAGCTCGACG AGTTCGTGCG CCAGCACGCC GAGACCGCCT ATCACCCCGC CGGCTCCTGC
AAGATGGGCA GTGCCGATGA CGCGATGGCG GTGGTCGATG GTGCGGGACG CGTGCATGGC
CTCGAAGGGC TGCGTGTCAT CGATGCCTCG ATCATGCCCG TGATCGCCAC CGGCAACCTC
AATGCGCCGA CGATCATGAT CGCCGAAAAG ATGGCCGACA AGGTTCGCGG TCGCGATCCG
CTGCCGCCGG CCAAGGTCGA CTACTACGTG GCCAACGGTG CGCCGGCCCG CCGTCGGGCG
TGA
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| Protein sequence | MTQAREYDYI IIGAGSAGNV LATRLTEDPD VQVLLLEAGG PDYRFDFRTQ MPAALAYPLQ
GKRYNWAFET DPEPYMNNRR MECGRGKGLG GSSLINGMCY LRGNALDYDN WAKIPGLEDW
NYLQCLPYFK RAETRDIGPN DYHGGDGPVS VATPKEGNNE LYGAFIRAGI EAGYPATEDV
NGYQQEGFGP MDRTTTPNGR RASTARGYLD IAKQRPNLTI ETHATTDVIE FEGKRAVGVS
YERKGQAQRV RARREVLLCA GAIASPQILQ RSGVGNPEHL EEFDIPVVHE LPGVGENLQD
HLEMYIQYEC KKPISLYPAL KWYNQPKIGA EWLFFGKGIG ASNQFEAAGF IRTNDQEEWP
NLQYHFLPIA ISYNGKSAVQ AHGFQAHVGS MRSMSRGRIR LTSRDPKAAP SILFNYMSHD
KDWQEFRDAI RITREIIEQP TMDEYRGREI SPGPNVQSDA ELDEFVRQHA ETAYHPAGSC
KMGSADDAMA VVDGAGRVHG LEGLRVIDAS IMPVIATGNL NAPTIMIAEK MADKVRGRDP
LPPAKVDYYV ANGAPARRRA
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