Gene Csal_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1424 
Symbol 
ID4027976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1611475 
End bp1612989 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content61% 
IMG OID637966608 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_573477 
Protein GI92113549 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCTC TCATATCGCT CGCTCCCCCC ATCGCCGCCG TCGTGCTGGC GCTGCTTACC 
CGCCGAGTCA ATATCTCGCT CTTCCTGAGT ATTTTACTGG GCGCCTGGAT CGTTGCAGGC
AATCCGATTT CCGCCGTTGG CCAGACGTTC GACTGGTTCG CGGAGGTGAT GACCGATGAA
TGGAATGCGC GCTTTCTCGT ACTTGTCTCC TTGCTCGGCG CCGGCGCAGC CTTCATGCAT
ACCACCGGTG GCTCCCAGGC CTTGGCCAGG TGGCTTTCCG GCAAGGTTTC CTCCTCGAAA
GGCTCGCTGC TGCTCACCTG GCTGCTCGGC GTCGTGATCT TTTTCAACGA CTACGTCAAT
TCCGTCATCG TGGGAAACGC CTCACGAGAC CTGACGGCCA GGCACAACGT CTCGAGGGAA
AAGCTGGCCT GGACCATCGA TGCAACATCC GCGCCGATGG CGACCCTGGG TCCCGTCTCC
GACTGGATCG GTTATCAGGT CTCGCTCATC GCCGGTGCAT TCGCCGTGCT CAGCTTGACC
GGAGAACAAC CCTACTGGGC CTTCCTGCAG TCGATACCCT GGAATTTCTA TGCCCTGCTG
TGTCTCGCCT CGGTGCCCAT GATCCTCCTC ATGGGCGACT TCGGCCCCAT GAAACGCGCC
GAGCGTCGCG CACAAGAAAC CGGCGAACTC GTCGCCCCCG GCGACAACCC GTTATCCAGC
GTCGAGGAAG ACCTGGGTGA GGTCCCTGAA GACCGGGGAC GCGTCTGGAA TTTCTTGATT
CCGCTTGTGG TACTCATCGG CGTCGCGTGC TGGGCACTCT GGTACACGGG CGGCGGCAAC
GAAGGCAAGC CGCTGATGGA GGCCATCGCG GATACCGATG TCAGTGTCTC GCTCAGTTGG
GCCGCGTTCG CGATGGTCGT TGTCGGGATC GTCATGGCGC TGCTTCAGCG ACAATCGCTG
GAAGCCTGCG AGAACACCTT GCTGGCGGGC TTCAAGACCA TGCTGCCGGC GCTGGTCATC
ATGGTGCTGG CCTGGTCGAT CGGCACCGTC ACCGGCGCGC TCGAAACCGG CGATCACGTC
ATCGCAGCGA CGGAGAGCTG GCTATCGCCG ACGCTACTGC CGATCCTCAT TTTCGCAATT
GCCATGGTGA TATCTTTCTC GACCGGCAGT TCCTGGGGTG CCATGGCGAT TTTGACGCCG
ATCGGGGTCC CCCTGGCATA CAACATCGGC GACATGACAC TCGTGAGCAT GGCGATCGGC
GCTATCTTCT CCGGCTCGAT TTTCGGCGAT CACTGCTCGC CCATCTCGGA CACGACAGTC
ATGGCCTCGA TCTTCTCCGG CTCCGACCAC GTCGCACACG TCAAAACCCA AATCCCCTAT
GCGCTCGTTC CGGCTTCCGT GAGCGCCCTG CTCTACCTCG GGACGATCGT CATCGCATCC
CCTTATATCT TGCTGGCTGT CGGGCTGGTC CTGCAGGCCG TGATCATCAA ACTCTTGGCC
TCGAGACGCA CCTGA
 
Protein sequence
MDALISLAPP IAAVVLALLT RRVNISLFLS ILLGAWIVAG NPISAVGQTF DWFAEVMTDE 
WNARFLVLVS LLGAGAAFMH TTGGSQALAR WLSGKVSSSK GSLLLTWLLG VVIFFNDYVN
SVIVGNASRD LTARHNVSRE KLAWTIDATS APMATLGPVS DWIGYQVSLI AGAFAVLSLT
GEQPYWAFLQ SIPWNFYALL CLASVPMILL MGDFGPMKRA ERRAQETGEL VAPGDNPLSS
VEEDLGEVPE DRGRVWNFLI PLVVLIGVAC WALWYTGGGN EGKPLMEAIA DTDVSVSLSW
AAFAMVVVGI VMALLQRQSL EACENTLLAG FKTMLPALVI MVLAWSIGTV TGALETGDHV
IAATESWLSP TLLPILIFAI AMVISFSTGS SWGAMAILTP IGVPLAYNIG DMTLVSMAIG
AIFSGSIFGD HCSPISDTTV MASIFSGSDH VAHVKTQIPY ALVPASVSAL LYLGTIVIAS
PYILLAVGLV LQAVIIKLLA SRRT