| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1334 |
|---|
| Symbol | |
|---|
| ID | 4027729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1526849 |
|---|
| End bp | 1527661 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637966513 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_573388 |
|---|
| Protein GI | 92113460 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGA TTGCTATCGA GCAGATTCCG GGGCGCGCCA GTCTCGCCCC CGTGCGGGTC
GGCGAGATCT CCATCGATGA GGCCGCCATC GCCCGGGAAA CGCAATATCA CCCGGCGGAG
AGCGCCGGCG ATGCTCGGTA CAAGGCGGCC CGTGCCCTGG TGGTGCGCGA GCTGCTGCGT
CAGCGTGCCG GGCAGTTGGG ACTGGCGGTG GAAGGCGAGT CGAATATCGA GGTCTCCATT
GCCGCGCTGC TGGAGCGCGA GCTGGAAGTC CCCGAGCCCT CCGAGGCCGA CTGCCGCCGC
TTCCACGCCG CCCACGCCGA GCGCTTCAGC GAACCCACCC GTCTCAGGGT GCGGCATATC
CTGCTGGCGG CGGCGCCGGA CGATGCCGAG GCCCGTGATA CCGGTTACCG TCTGGGTGAG
ACGCTTATCA CGCAATTGAG CGAATGCCCC GAGCGCTTCA CCGAGTTCGC CCAGCGCCAT
TCCGCCTGCC CCTCGAAGGA CAAGGGCGGC GAGCTGGGCT GGCTGGCGCC CGGCCAGACG
GTGCCCGAGC TGGATCGTGC CCTGCAGCAC CTGGCGACCG GGCTCCATGC ACGGCCGCTG
GCCTCCCGCT ACGGCTGGCA CCTGGTGAGC CTCGACGCCC GCGAGGAGGG GCGGGCGCTG
CCCTACGACG CGGTCGCCGA GCGGGTCCGG CACAGCCTGC GTGAACAGGC CACCCGCCGC
GCCCTGCGCC ACTACCTGCT GGCGCTGGAG GATGACATCG GTATTCAGGG GTTTCGGCTC
GACGAACAGG CGGATGGTTC CCTGATGCAA TGA
|
|---|
| Protein sequence | MQKIAIEQIP GRASLAPVRV GEISIDEAAI ARETQYHPAE SAGDARYKAA RALVVRELLR
QRAGQLGLAV EGESNIEVSI AALLERELEV PEPSEADCRR FHAAHAERFS EPTRLRVRHI
LLAAAPDDAE ARDTGYRLGE TLITQLSECP ERFTEFAQRH SACPSKDKGG ELGWLAPGQT
VPELDRALQH LATGLHARPL ASRYGWHLVS LDAREEGRAL PYDAVAERVR HSLREQATRR
ALRHYLLALE DDIGIQGFRL DEQADGSLMQ
|
|---|
| |