Gene Csal_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1276 
Symbol 
ID4027749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1456390 
End bp1457328 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content66% 
IMG OID637966455 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_573330 
Protein GI92113402 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATA CACGGCCACT GGCCCTTTTG CTGATGGGCC CGACGGCGGC CGGCAAGACC 
GATCTGGCCA TCGCGCTACG CGAGCGGCTG GGAGGAGAAT TGATCAGCGT CGACTCGGCG
ATGATCTATC GTGGCATGGA TATCGGCACC GCGAAGCCGT CCGCCCAGGA GCTGGCGCGT
GCGCCGCATC GCCTGATCGA CATTCGCGAT CCGGCCGAGA CGTATTCCGC CGCCGAGTTT
CGCGACGATG CCCTGGCCGA GATGCGCGAC ATCTCGTCGC AGGGGCGTAC GCCGATCCTC
GTCGGTGGCA CCATGATGTA CATCAAGCGT TTGATCGATG GTGTGGCCTC GTTGCCGGCA
CGCGATCCGG CACTCCGGGA AGCGCTGAAT GCCCGGGCCG AGAGCGAGGG ATTGGTGGCT
CTGCACCGGG AGCTGTCGCG TGTCGATCCG GTAGCCGCCG AGACGATCCA TCCGCACAAC
CGACAGCGAT TGCTGCGGGC CCTGGAGGTC TATCAGCTCA CGGGGCGGGC GCTGGGGGAA
CTGTGGGCCG AACAGGCCCG CGAAACCTTT CCCTGGCGGC TCGTGTCCAT AGCCCTGGCG
CCGAATGCGC GCCACGTGCT GCATGCGCGC ATCGCCGAGC GCTTCGACAG CATGCTGGCG
GCGGGCTTCC GCGATGAGGT GGCGGCGCTT CAGGCACGCG GAGACCTGCA TCGAGGACTC
CCCGCCATAC GTTGCGTGGG CTATCGTCAA ATGTGGGAGC ATCTGCGCGG CGAGACGGAC
GCGGCGACGA TGCGCGAGCG CGGCCTGGCC GCGACGCGAC AACTCGCCAA GCGTCAGTTG
ACCTGGCTGC GCGGCTGGGA GGGCGTGCAC TGGATCGACA GCGATGCCTC GGACGCACAT
GAACAGGTAT TGAAAATCGT GCGCGGAAGC AGCACTTAG
 
Protein sequence
MSDTRPLALL LMGPTAAGKT DLAIALRERL GGELISVDSA MIYRGMDIGT AKPSAQELAR 
APHRLIDIRD PAETYSAAEF RDDALAEMRD ISSQGRTPIL VGGTMMYIKR LIDGVASLPA
RDPALREALN ARAESEGLVA LHRELSRVDP VAAETIHPHN RQRLLRALEV YQLTGRALGE
LWAEQARETF PWRLVSIALA PNARHVLHAR IAERFDSMLA AGFRDEVAAL QARGDLHRGL
PAIRCVGYRQ MWEHLRGETD AATMRERGLA ATRQLAKRQL TWLRGWEGVH WIDSDASDAH
EQVLKIVRGS ST