Gene Csal_1226 details

Gene Information

• Locus tag: Csal_1226
• ID: 4027547
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: -
• Start bp: 1405512
• End bp: 1406141
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637966404
• Product: NAD-dependent epimerase/dehydratase
• Protein accession: YP_573280
• Protein GI: 92113352
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0702] Predicted nucleoside-diphosphate-sugar epimerases

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACGC TCGTCATCGG CGCCAACGGT CAGATCGGCC GCCAGTTCTG CGAACTCGCC 
CACCAGGCCG GTGTGCCGAT TCGCGCCATG ATCCGTGACA CGGCCCAGCA GGCATGGTTT 
CAGGCGCGTG GCATCGAGAC GGTGCTCGCC GATCTGGAAG GCAACTTTCG AAAGGCGTTC 
TACGGCTGCG ATCAGGTGGT GTTCGCGGCG GGCTCCGGCC CGCATACCGG CCCCGACAAG 
ACACTCATGA TCGATCTGCA TGGTGCGTTG AGCGCGATCG ACCTGGCCGC GACGCTGGGC 
ATCGGGCGTT TCATCATGGT CAGCGCCATG CGGGCCGACC GGGTCCTCGA GGCCCCGGCC 
AAGCTGCGCC CCTACATGGC CGCCAAGCAT GCCGCCGACG CGCACCTGCG CGCATCACGT 
GTGCCCCATG TGATTCTCAA GCCCGGCCGG CTCACCGACG AGGCCGCGAC ACGGCGGGTC 
ACGACCGACG TGGCCGGCGC CGACGACAAC CGTATCTCGC GCGCCAATGT CGCCCATGCA 
CTGCTCGAAG TGGTGCGCCG TCACGACCTG CGCCAACGCG AGTTCTCGCT ACTCGACGGT 
GATACCGACA TCGCCGAGGC ATTGCGCTGA 

 

Protein sequence

MKTLVIGANG QIGRQFCELA HQAGVPIRAM IRDTAQQAWF QARGIETVLA DLEGNFRKAF 
YGCDQVVFAA GSGPHTGPDK TLMIDLHGAL SAIDLAATLG IGRFIMVSAM RADRVLEAPA 
KLRPYMAAKH AADAHLRASR VPHVILKPGR LTDEAATRRV TTDVAGADDN RISRANVAHA 
LLEVVRRHDL RQREFSLLDG DTDIAEALR