Gene Csal_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1202 
Symbol 
ID4027347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1378303 
End bp1379334 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content44% 
IMG OID637966378 
ProductRNA-directed DNA polymerase (Reverse transcriptase) 
Protein accessionYP_573256 
Protein GI92113328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACACA CGTACTACCC CCATCACCCC ATCAATAGCC TGAAAGCCCT TAACAGGGCC 
CTCGGCATTG ATGAGGATGA AATATTTCAT GCTCTGAGCA ACATTAGCTA CAAAGAAGTC
CCAATAAAGA AAAAAGACGG AGCAATTCGC GTCACTTATG ATGCCACCTC AGCCTTAAAG
GTCGTGCAAA AAAAAGTCAC CTCCAACATC TTCCATCGCG TAAATTTTCC TCACTATATA
CACGGATGCA TCCGAGACAC AAAAACTCCT AGAAATATCT ATACTAACGC TTACCCTCAC
GCAGGCTGCA AGCAAGTCAT ACTGTGCGAC ATAAAAGACT TCTTCCCTTC TATCAAAGCG
AAAACTGTTT TTTTTATTTT TAGGCATTGT TTAGGTTTTT CACCAAACGT GTCACAGAGA
CTGACCGATC TATGCACATA TAATGGCACA CTACCACAGG GCGCCAGCAC CAGCAGCTAC
ATTGCCAACT TAGCCTTTTG GGATGTTGAG CCATTACTGG TTAAGAAACT AGAAAGCCTT
GGACTAACTT ACACCCGTTT TGCTGACGAC ATCACGATTT CTGCCAAAAA AAGTATTTCA
AAAAGCCTTA AGACCCAAGT TCTTCATGAG GTCAGGAGAA CAATACGAAA AAGAGGCTGC
TCCCTCAAGA AGAACAAGAC CATAGTCCTA AAGCGGAGCC AGGTAATCAT AGGAAAAGAC
AAAGAAACGC AAGAGACCAC CCGCAACCCA ATCACAGTAA CCAGCCTTTC CATTCACCAC
AGCAGTGTAA CTATTAGCAA AGTAGAACGA CGAAAAGTGC GGGCCTTTGT CGATAAATTA
TCGAAAACTG AATTTAACAG AGTTTCCTAT CACGAATGGT GCCGTAGATA CTCAAGCGCC
ATGGGCCGAG TCTCCAGATT AATCAGCTGT GGACATAAAG AAGGCGAGCC GCTGAAGCAA
CGGCTCAAAG CTCTGAAAGA TGAACACAAG AAGTTTCATC AGCGCAGCTC CAATGTCTCT
GGCCGAAAAT GA
 
Protein sequence
MEHTYYPHHP INSLKALNRA LGIDEDEIFH ALSNISYKEV PIKKKDGAIR VTYDATSALK 
VVQKKVTSNI FHRVNFPHYI HGCIRDTKTP RNIYTNAYPH AGCKQVILCD IKDFFPSIKA
KTVFFIFRHC LGFSPNVSQR LTDLCTYNGT LPQGASTSSY IANLAFWDVE PLLVKKLESL
GLTYTRFADD ITISAKKSIS KSLKTQVLHE VRRTIRKRGC SLKKNKTIVL KRSQVIIGKD
KETQETTRNP ITVTSLSIHH SSVTISKVER RKVRAFVDKL SKTEFNRVSY HEWCRRYSSA
MGRVSRLISC GHKEGEPLKQ RLKALKDEHK KFHQRSSNVS GRK