Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1197 |
Symbol | |
ID | 4027342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 1372060 |
End bp | 1373349 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637966374 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_573252 |
Protein GI | 92113324 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.256895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGCAGTA CCGTCTCCGA TCCTCCTGCT TCTTGGTATC GGGCCTCCAT CGCCGTCGAG CTCGAGCCCA GCCAACCTCT GGAAGGCGAC ACCCGGGCCG ACGTATGCGT GATCGGCGGC GGGGTGACCG GCTGTTCCAC GGCGCTGCAT CTGGCCGAAC GCGGCTACTC GGTAGTACTG CTCGAGGCCG GCGACATCGG CCACGGCGCC TCCGGCCGCA GCGGCGGGCA GATCCTGCCC GGGCTGGGCA CCGATATCAC TACCGTCCAG CAGGCCCTCG GGCTGCCCCG TGCCCGTGAA ATATGGGAAA TGAGCCGCGA GGCGGTACGC CTCACCGCCG AGCTGGTCGA GCGTCATGCG ATTCCCTGCG AACTGGCCTG GGGCTACCTG CACGCGGCGG TCAAGCCGCG CCATATCAAG GAACTCTCGT CCTTCCGCGA GCAGATGGCC CGCGACTACG ACTACGACGC CCTGACATGG CTAGAAGGCG ATGCCCTGCG CGAGCACGTG GTCACCGACA CCTACCCGGC GGCCCTCCAT GACCGTGAGG GTGGGCACCT CCATCCTCTC AACTACACCC TGGGTCTGGC CCGGGCGGCA CAGCGCGCCG GCGTGCGCGT GCACCCGCGC AGCGCCGCCC GCGAAATCCG CCGCGGGCAG CCGGCCACGG TCATCACCGA ACGCGGCCAG GTGACCGCCG ACTTCGTGGT ACTGGCCACC AATGCCTATC ACGGCGACCT GGTGCCGGAG CTCTCCGGAC GCATCATGCG CGCCGCCAAC TACATGATCG CCACCGCCCC CTTGAGCGAG GCCCAGGCGG CGCAGGTGCT GCCGCAGAAC GATGCCCTGG CCGACGCCAA TTTCGTGCTC GACTACTATC GTCTCAGTGC CGACCGCCGC TTGATCTACG GCGGCGAGGT CAGCTACGAC GGCCGCGAGC CGCCGAAGCT GCAGGCACGC ATGGATGCCA AGATCGCCCG GCTGTTTCCG GTGCTGGAAG GCGTCCCCAT CGAGTATCGA TGGGGCGGCG ACGTGGCCAT CACCCTGAAC CGGGCTCCCG ACTTCGGCCG CCTGGGCGAC AATCTCTATT ATGCCCAGGG CTACTCCGGG CACGGCATGG CCATGGCAGG ACTGGCCGGC AAGCTGATGG CCGAGGCCAT CGCCGGGCAG AGCGAGCGTT TCGATGTCTT CGCTGCCATG CCACACCGGC AGTTCCCGGG TGGGCGAGCC CTGCGCAAGC CCCTGCTGGT ACTGGCTACC AACTTCTACA AACTGCGCGA CCGGCTCTGA
|
Protein sequence | MCSTVSDPPA SWYRASIAVE LEPSQPLEGD TRADVCVIGG GVTGCSTALH LAERGYSVVL LEAGDIGHGA SGRSGGQILP GLGTDITTVQ QALGLPRARE IWEMSREAVR LTAELVERHA IPCELAWGYL HAAVKPRHIK ELSSFREQMA RDYDYDALTW LEGDALREHV VTDTYPAALH DREGGHLHPL NYTLGLARAA QRAGVRVHPR SAAREIRRGQ PATVITERGQ VTADFVVLAT NAYHGDLVPE LSGRIMRAAN YMIATAPLSE AQAAQVLPQN DALADANFVL DYYRLSADRR LIYGGEVSYD GREPPKLQAR MDAKIARLFP VLEGVPIEYR WGGDVAITLN RAPDFGRLGD NLYYAQGYSG HGMAMAGLAG KLMAEAIAGQ SERFDVFAAM PHRQFPGGRA LRKPLLVLAT NFYKLRDRL
|
| |